Jurnal AgroBiogen
Vol 15, No 1 (2019): June

Genetic Diversity of Jatropha spp. Germplasm Based on Morphological and Molecular Markers

Rerenstradika T. Terryana (Balai Besar Penelitian dan Pengembangan dan Sumberdaya Genetik)
Kristianto Nugroho (Balai Besar Penelitian dan Pengembangan dan , Jl. Tentara Pelajar 3A, Bogor 16111 Indonesia Telp. (0251) 8337975
Faks. (0251) 8338820)

Karden Mulya (Balai Besar Penelitian dan Pengembangan dan , Jl. Tentara Pelajar 3A, Bogor 16111 Indonesia Telp. (0251) 8337975
Faks. (0251) 8338820)

I Made Tasma (Balai Besar Penelitian dan Pengembangan dan , Jl. Tentara Pelajar 3A, Bogor 16111 Indonesia Telp. (0251) 8337975
Faks. (0251) 8338820)

Puji Lestari (Balai Besar Penelitian dan Pengembangan dan , Jl. Tentara Pelajar 3A, Bogor 16111 Indonesia Telp. (0251) 8337975
Faks. (0251) 8338820)



Article Info

Publish Date
03 Sep 2019

Abstract

Germplasm of Jatropha spp. with high genetic diversity is needed to develop a new superior variety of Jatropha spp. Morphological and molecular characterizations are important to support development of their superior hybrid varieties. The aims of this study were to identify Jatropha spp. accesion potential for genetic improvement using morphological characters and analyze their genetic diversity using SSR markers. A total of eight genotypes of Jatropha spp. originated from several localities in Indonesia and Thailand was observed. Results showed that accessions of Jatropha spp. were varied in morphological and molecular characters. Based on principle component analysis, characters of stem color, leaf veins, leaf shapes, flower position, total branch number, productive branch number, petiole color, and petal color contributed most to the total diversity. Based on oil seed content, potential accessions identified for further genetic improvement were J. podagrica (34.63%) and J. curcas (29.64%). The results of molecular analysis showed that high allele variation (3–7 alleles) was observed among Jatropha spp. accessions with an average allele number of 4.12 and the average Polymorphism Information Content (PIC) value was 0.57 (0.46–0.77). Three SSR markers showed PIC value >0.5 indicating that these markers were informative for genetic diversity detection of Jatropha spp. The phylogenetic analysis showed that seven accessions of Jatropha spp. could be divided in two groups at similarity coefficent of 0.53. Results of genetic diversity analysis in this study should be useful for proper identification and selection for appropriate parents to assist in breeding of Jatropha spp. in Indonesia.

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Journal Info

Abbrev

JAB

Publisher

Subject

Agriculture, Biological Sciences & Forestry

Description

Jurnal AgroBiogen memuat artikel primer dan sekunder hasil penelitian bioteknologi dan sumberdaya genetik tanaman, serangga, dan mikroba pertanian. Jurnal ini diterbitkan tiga kali setahun pada bulan April, Agustus dan Oktober oleh Balai Besar Penelitian dan Pengembangan Bioteknologi dan Sumberdaya ...