International Journal of Electrical and Computer Engineering
Vol 10, No 1: February 2020

Microarray spot partitioning by autonoumsly organising maps thorugh contour model

Karthik S. A. (Dayananda Sagar Academy of Technology and Management)
Manjunath S. S. (ATME)



Article Info

Publish Date
01 Feb 2020

Abstract

In cDNA microarray image analysis, classification of pixels as forefront area and the area covered by background is very challenging. In microarray experimentation, identifying forefront area of desired spots is nothing but computation of forefront pixels concentration, area covered by spot and shape of the spots. In this piece of writing, an innovative way for spot partitioning of microarray images using autonomously organizing maps (AOM) method through C-V model has been proposed. Concept of neural networks has been incorpated to train and to test microarray spots.In a trained AOM the comprehensive information arising from the prototypes of created neurons are clearly integrated to decide whether to get smaller or get bigger of contour. During the process of optimization, this is done in an iterative manner. Next using C-V model, inside curve area of trained spot is compared with test spot finally curve fitting is done.The presented model can handle spots with variations in terms of shape and quality of the spots and meanwhile it is robust to the noise. From the review of experimental work, presented approach is accurate over the approaches like C-means by fuzzy, Morphology sectionalization.

Copyrights © 2020






Journal Info

Abbrev

IJECE

Publisher

Subject

Computer Science & IT Electrical & Electronics Engineering

Description

International Journal of Electrical and Computer Engineering (IJECE, ISSN: 2088-8708, a SCOPUS indexed Journal, SNIP: 1.001; SJR: 0.296; CiteScore: 0.99; SJR & CiteScore Q2 on both of the Electrical & Electronics Engineering, and Computer Science) is the official publication of the Institute of ...