TELKOMNIKA (Telecommunication Computing Electronics and Control)
Vol 15, No 2: June 2017

Prediction of Bioprocess Production Using Deep Neural Network Method

Amirah Baharin (Universiti Teknologi Malaysia)
Afnizanfaizal Abdullah (Universiti Teknologi Malaysia)
Siti Noorain Mohmad Yousoff (Universiti Teknologi Malaysia)



Article Info

Publish Date
01 Mar 2017

Abstract

Deep learning enhanced the state-of-the-art methods in genomics allows it to be used in analysing the biological data with high prediction. The training process of neural network with several hidden layers which has been facilitated by deep learning has been subjected into increased interest in achieving remarkable results in various fields. Thus, the extraction of bioprocess production can be implemented by pathway prediction in genomic metabolic network in eschericia coli. As metabolic engineering involves the manipulation of genes which have the potential to increase the yield of metabolite production. A mathematical model of this network is the foundation for the development of computational procedure that directs genetic manipulations that would eventually lead to optimized bioprocess production. Due to the ability of deep learning to be well suited in terms of genomics, modelling for biological network can be implemented. Each layer reveal the insight of biological network which enable pathway analysis to be implemented in order to extract the target bioprocess production. In this study, deep neural network has been to identify any set of gene deletion models that offers optimal results in xylitol production and its growth yield. 

Copyrights © 2017






Journal Info

Abbrev

TELKOMNIKA

Publisher

Subject

Computer Science & IT

Description

Submitted papers are evaluated by anonymous referees by single blind peer review for contribution, originality, relevance, and presentation. The Editor shall inform you of the results of the review as soon as possible, hopefully in 10 weeks. Please notice that because of the great number of ...