Bumi Lestari
Vol 12 No 2 (2012)

APLIKASI POLYMERASE CHAIN REACTION-RIBOSOMAL INTERGENIC SPACER ANALYSIS (PCR-RISA) UNTUK MENENTUKAN KERAGAMAN MIKROBA TANAH PADA HABITAT TANAMAN PISANG DENGAN DAN TANPA GEJALA LAYU FUSARIUM

I Made Sudarma (Staf dosen Jurusan Agroiekoteknologi, Fakultas Pertanian Universitas Udayana)
Dewa Ngurah Suprapta (Staf dosen Jurusan Agroiekoteknologi, Fakultas Pertanian Universitas Udayana)
I Made Sudana (staf dosen Jurusan Agroiekoteknologi, Fakultas Pertanian Universitas Udayana)
I Gede Rai Maya Temaja (staf dosen Jurusan Agroiekoteknologi, Fakultas Pertanian Universitas Udayana)



Article Info

Publish Date
01 Aug 2012

Abstract

A major problem in the soil microbiology is 99% soil microbes could not be grown in artificial media; therefore, to describe the true diversity of microbes in the soil must use a molecular approach. The approach was polymerase chain reaction-ribosomal intergenic spacer analysis (PCR-RISA). This method can be used for determining soil microbial DNA profile (the number of DNA bands). The soil samples were collected from three regencies in Bali,  i.e. Karangasem, Klungkung and Jembrana which are the main banana growing area in Bali. Soil sampling was done in two sites in each regency representing the banana habitat with and without Fusarium wilt symptom, by collecting 100 grams of soil surrounding the banana plant at the depth of 20 cm. The result of PCR-RISA showed that DNA profile of the soil microbes in the soil of banana habitat without Fusarium wilt symptom (HN) more than of the soil banana habitat with Fusarium wilt symptom (HF). DNA profiles at HN there were three, each of the indicated 450 bp, 250 bp and <100 bp, whereas in HF were two bands of DNA, each indicated as 250 bp and <100 bp. Based on the number of DNA bands proved that the soil microbial community in the HN is higher than in HF.

Copyrights © 2012






Journal Info

Abbrev

blje

Publisher

Subject

Agriculture, Biological Sciences & Forestry Humanities Earth & Planetary Sciences Energy Environmental Science

Description

Bumi Lestari Journal of Environment (p-ISSN: 1411-9668; e-ISSN: 2527-6158) is a peer-reviewed journal, presents original research articles and letters in all areas of environmental studies and environmental sciences (biotic, abiotic and social/cultural). This journal has been indexed by cabdirect ...