HAYATI Journal of Biosciences
Vol. 29 No. 3 (2022): May 2022

Population Analysis and Genetic Structure of Two Kazakh Cattle Breeds Using 150K SNP

Indira Beishova (Nonprofit JSC "Zhangir Khan West Kazakhstan Agrarian Technical University", 51 Zhangir Khan str., Uralsk, Republic of Kazakhstan)
Kairat Dossybayev (RSE "Institute of Genetics and Physiology" CS MES RK, 93 Al-Farabi Ave., Almaty, Republic of Kazakhstan
Faculty of Biology and Biotechnology, Al-Farabi Kazakh National University, 71 Al-Farabi Ave., Almaty, Republic of Kazakhstan)

Alzhan Shamshidin (Nonprofit JSC "Zhangir Khan West Kazakhstan Agrarian Technical University", 51 Zhangir Khan str., Uralsk, Republic of Kazakhstan)
Alena Belaya (Belarusian State Pedagogical University named after Maxim Tank, 18 Sovetskaya str., Minsk, Republic of Belarus)
Anuarbek Bissembayev (Limited Liability Partnership "Scientific and Production Center of Animal Husbandry and Veterinary Medicine", 2, apt. 85 Yevgeny Brusilovsky str., Baykonyr district, Nur-Sultan, Republic of Kazakhstan)
Kadyrzhan Khamzin (LTD “Kazakh Scientific Research Institute of Animal Husbandry and Forage Production”, 51 Zhandosov str., Almaty, Republic of Kazakhstan)
Alexandr Kovalchuk (Nonprofit JSC "Zhangir Khan West Kazakhstan Agrarian Technical University", 51 Zhangir Khan str., Uralsk, Republic of Kazakhstan)
Askar Nametov (Nonprofit JSC "Zhangir Khan West Kazakhstan Agrarian Technical University", 51 Zhangir Khan str., Uralsk, Republic of Kazakhstan)



Article Info

Publish Date
01 Mar 2022

Abstract

Kazakh white-headed and Auliekol breeds are mostly spread through Kazakhstan and are animals with dual purpose productivity directions including meat and milk. Kazakh native cattle breeds are still largely unexplored based on the genetic markers and are of great interest in the country. In this study, we for the first time applied high-density SNP genotyping for two indigenous cattle breeds to study genetic diversity, population structure and relationships with the different foreign breeds. Using of GGP Bovine 150K SNP array the principal component analysis (PCA), populations estimates of the genetic structure (ADMIXTURE), genetic diversity and distances (Fst), and phylogenetic tree showed that the Kazakh white-headed and Auliekol breeds have certain separate genetic structure that differ from European and Russian cattle breeds The two of these Kazakh cattle breeds have their genetic background according to observed results as distinct breeds. The obtained results will be aided in the development breeding system and conservation programs of the Kazakh white-headed and Auliekol breeds of beef cattle in the Kazakhstan.

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Journal Info

Abbrev

hayati

Publisher

Subject

Agriculture, Biological Sciences & Forestry Earth & Planetary Sciences

Description

HAYATI Journal of Biosciences (HAYATI J Biosci) publishes articles and short communication in tropical bioscience fields such as development, biotechnology, biodiversity and environmental issues. HAYATI J Biosci covers wide range of all life forms topics including virus, microbes, fungi, plants, ...