Journal of Molecular Docking
Vol. 2 No. 1 (2022): Journal of Molecular Docking

Pharmacophore Based Virtual Screening and Docking of Different Aryl Sulfonamide Derivatives of 5HT7R Antagonist

Nahid Fatema (Maulana Azad National Urdu University)
Vijjulatha Manga (Osmania University)
Lingala Yamini (Osmania University College for Women)
Salman Ahmad Khan (Maulana Azad National Urdu University)
Qasim Ullah (Maulana Azad National Urdu University)



Article Info

Publish Date
30 Jun 2022

Abstract

The selective blockade of 5HT7R (5-hydroxytryptamine 7 receptor) displays an antidepressant-like activity. It is a Gs-coupled receptor, which inactivates the adenyl cyclase enzyme or activates the potassium ion channel. Structural information of 5HT7 was obtained by homology modeling using MODELLER v.9.13. In the present study, pharmacophore-based virtual screening, molecular docking, and binding free energy calculations were performed on a series of antagonist aryl sulphonamide derivatives. A five-point pharmacophore hypothesis with two hydrogen bond acceptor (A), one hydrogen bond donor (D), one positive group (p), and one ring (R) was developed with acceptable R2 and Q2 values of 0.90 and 0.602, respectively. Eventually, common pharmacophore hypothesis-based screening was conducted against Asinex databases. Finally, binding free energy and dock score analysis was carried out for the top hits obtained from the docking process. All 14 hits from the database in this study had a satisfactory dock score and binding energy values within the best active compound range. H bond interaction with amino acid residues Ser212 and π-π stacking with Tyr249 were investigated for the best active molecule. Both are present in the top hits, including other interactions as well.

Copyrights © 2022






Journal Info

Abbrev

jmd

Publisher

Subject

Medicine & Pharmacology

Description

Journal of Molecular Docking is an international scientific platinum open access journal managed by the Department of Pharmacy, Universitas Muhammadiyah Palangkaraya and published two times a year in June and December by Institute for Researches and Community Services Universitas Muhammadiyah ...