Jurnal Ilmu Ternak Veteriner
Vol 28, No 2 (2023): June 2023

The 84-bp Indel Polymorphism of The Sterol Regulatory Element-Binding Protein 1 (SREBP1) Gene in Several Cattle Breeds in Indonesia

Saiful Anwar (Research Center for Applied Zoology, National Research and Innovation Agency (BRIN))
Widya Pintaka Bayu Putra (Research Center for Applied Zoology, National Research and Innovation Agency (BRIN))
Isyana Khaerunnisa (Research Center for Applied Zoology, National Research and Innovation Agency (BRIN))
Ari Sulistyo Wulandari (Research Center for Applied Zoology, National Research and Innovation Agency (BRIN))
Koko Wisnu Prihatin (National Artificial Insemination Center of Singosari, Ministry of Agriculture-Republic of Indonesia)
Sutikno Sutikno (Research Center for Applied Zoology, National Research and Innovation Agency (BRIN))



Article Info

Publish Date
27 Jun 2023

Abstract

Sterol regulatory element-binding protein 1 (SREBP1) gene is a gene that encodes SREBP1, a family of transcription factors that have a key role in lipid homeostasis as well as fatty acid metabolisms. The present study aimed to detect the 84-bp indel polymorphism in the intron 5 of the SREBP1 gene (84-bp indel) in several cattle breeds in Indonesia.  A total of 740 cattle of six breeds (Limousin, Simmental, Holstein-Friesian, Bali, Sumbawa, and Pasundan) from two National Artificial Insemination Centers (NAICs) and smallholder farmers were used in this study. The detection of 84-bp indel polymorphism was performed using the polymerase chain reaction (PCR) method and visualized through a gel agarose electrophoresis system. The study showed that the L allele (insertion-type) was common and is fixed in Holstein-Friesian, Bali, and Sumbawa cattle (1.00). Meanwhile, the S allele (deletion-type) was found in Limousin, Simmental, and Pasundan cattle with a frequency of 0.24, 0.16, and 0.01, respectively. The presence of the S allele in Pasundan cattle was only found in the form of the heterozygous LS genotype (0.03). In conclusion, the 84-bp indel of the SREBP1 gene was found to be polymorphic in Limousin, Simmental, and Pasundan cattle, but monomorphic in Holstein-Friesian, Bali, and Sumbawa cattle.

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Journal Info

Abbrev

JITV

Publisher

Subject

Veterinary

Description

Aims JITV (Jurnal Ilmu ternak dan Veteriner) or Indonesian Journal of Animal and Veterinary Sciences (IJAVS) aims to publish original research results and reviews on farm tropical animals such as cattle, buffaloes, sheep, goats, pigs, horses, poultry, as well as non domesticated Indonesian endemic ...