Jurnal Ilmiah Kedokteran Wijaya Kusuma
Vol 14, No 1 (2025): EDISI MARET 2025

Metagenomic Analysis of Intestinal Microbiota Derived from Stool Samples of Third-Trimester Pregnant Women

Mudyawati Kamaruddin (Graduate of Clinical Laboratory Science of Universitas Muhammadiyah Semarang Central Java, Indonesia)
Miftahul Khairiyah Zamzam (Graduate of Clinical Laboratory Science of Universitas Muhammadiyah Semarang Central Java, Indonesia)
Rahadian Pratama (Department of Biochemistry, Faculty of Mathematics and Natural Sciences, Bogor Agricultural University (IPB University), Bogor, Indonesia)
AbdurRahman Shakhr Nur (Graduate of Clinical Laboratory Science of Universitas Muhammadiyah Semarang Central Java, Indonesia)
Cut Muthiadin (Department of Biology Faculty of Science and Technology, UIN Alauddin Makassar, South Sulawesi, Indonesia)
Christine Sembiring (Sastriabudi Dharma Setia Foundation, Cisauk Tangerang, Banten, Indonesia)
Nurhidayat Triananinsi (Department of Biology Faculty of Science and Technology, UIN Alauddin Makassar, South Sulawesi, Indonesia)
Nurisyah Nurisyah (Faculty of Pharmacy, Health Polytechnical of Muhammadiyah Makassar, South Sulawesi Indonesia)
Ratnasari Dewi (Faculty of Pharmacy, Health Polytechnical of Muhammadiyah Makassar, South Sulawesi Indonesia)
Fatmawati Fatmawati (Health Polytechnical of Muhammadiyah Makassar, South Sulawesi Indonesia)
Erniawati Erniawati (Midwifery Academy of Tahirah Al Baeti Bulukumba, South Sulawesi Indonesia)
Jusni Jusni (Midwifery Academy of Tahirah Al Baeti Bulukumba, South Sulawesi Indonesia)
Basmiati Basmiati (Faculty of Health Technology, Megarezky University, Makassar South Sulawesi Indonesia13)



Article Info

Publish Date
11 Apr 2025

Abstract

Background: The human gut microbiota plays a unique role in metabolism, immunity, and nutrient absorption.  Various studies on the gut microbiota have identified a link between changes in bacterial abundance in the gut known as dysbiosis (imbalance) and the pathogenesis of certain disorders. It is known that an imbalance in the ratio of the phyla Firmicutes and Bacteroidetes has been associated with various chronic diseases, including inflammatory bowel disease and metabolic disorders. The Firmicutes/Bacteroidetes (F/B) ratio is a measure used to assess gut microbiota composition, which is believed to play a significant role in intestinal health and metabolism. Studies suggest that a higher F/B ratio is often associated with obesity and other metabolic conditions. Objective: This study aims to carry out metagenomic analysis of third-trimester pregnant women's faecal samples to predict degenerative diseases using third-generation whole genome sequencing, namely PromethION nanopore technology.  Method: Nanopore Technology: DNA sequencing of faecal samples from pregnant women in the third trimester was performed using the Oxford Nanopore Technology (ONT) device based on the Ligation Sequencing gDNA - Native Barcoding Kit 24 V14 and following its guidelines. Result: Based on the quality and quantity of total DNA reads from 20 stool samples from pregnant women, only 4 samples were continued for analysis (1A, 2A, 3A and 4A). The results of the abundance of intestinal microbiota based on the most abundant phylum are Proteobacteria, Bacteriodetes, and Firmicutes. Conclusion: Meanwhile, based on species abundance, it shows that Prevotella copri (phylum Bacteriodetes) is abundant in samples 2A, 3A and 4A, while in sample 1A the most abundant species is Succinivirio dextrinosolvens (phylum Proteobacteria). Bacteroidetes are a group of Gram-negative bacteria that are often found to increase in individuals with type 2 diabetes and obesity

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Journal Info

Abbrev

JIKW

Publisher

Subject

Biochemistry, Genetics & Molecular Biology Medicine & Pharmacology Public Health

Description

Jurnal Ilmiah Kedokteran Wijaya Kusuma (JIKW) is a periodically scientific publication that contains articles written in Indonesia or english. JIKW receive articles in the scope of Biomedical Sciences, degenerative diseases, infections, congenital abnormalities and public health. JIKW published ...