ALCHEMY Jurnal Penelitian Kimia
Vol 22, No 1 (2026): March

Modification of Chroman Derivative Compounds and Their In Silico Antibacterial Activities

Jufrizal Syahri (Muhammadiyah University of Riau)
Rahmiwati Hilma (Muhammadiyah University of Riau)
Nurlaili Nurlaili (Andalas University)



Article Info

Publish Date
31 Mar 2026

Abstract

This study reports the alkaline reflux synthesis of 6-chloro-4-chromanone (Ch) with the secondary amine dimethylamine (DA) to obtain chromanone-derived compounds with potential antibacterial activity. Spectroscopic analyses confirmed that 6-chloro-3-((dimethylamino)methyl)chroman-4-one (Ch-DA) was successfully formed in 46.37% yield and corresponded to the targeted structure. In silico antibacterial studies were performed to evaluate the interaction between the synthesized compound and the target protein (PDB ID: 3VOB). Molecular docking results indicated that Ch-DA exhibits antibacterial potential through the formation of hydrogen bonds with key amino acid residues at the active site. The standard ligand (9PC) showed a CDOCKER energy of-46.4867 kcal/mol with seven hydrogen bonds involving residues VAL310, ASN263, VAL207, ASN208, GLY205, LEU209, and GLY196. Meanwhile, Ch-DA demonstrated a CDOCKER energy of -34.3506 kcal/mol with three hydrogen bonds at GLY196, THR265, and ASP199. The positive control, chloramphenicol, produced a CDOCKER energy of -48.0224 kcal/mol and formed three hydrogen bonds with THR309, GLY205, and GLY196, whereas the precursor compound (Ch) showed lower activity (-27.546 kcal/mol) without hydrogen bond formation. These results indicate that the incorporation of a secondary amine group enhances antibacterial activity, with docking performance comparable to the positive control, suggesting that Ch-DA has potential as antibiotic drugs.

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Journal Info

Abbrev

alchemy

Publisher

Subject

Chemical Engineering, Chemistry & Bioengineering Chemistry Energy Environmental Science Materials Science & Nanotechnology

Description

ALCHEMY Jurnal Penelitian Kimia is a chemistry journal published by Sebelas Maret University, Surakarta. ALCHEMY Jurnal Penelitian Kimia publishes original research articles or review articles in organic chemistry, inorganic chemistry, analytical chemistry, physical chemistry, biochemistry, and ...