Treubia
Vol. 37 (2010): Vol. 37, December 2010

THE DNA SEQUENCE PERFORMANCE OF COI GENE IN WHITE COCKATOOS (CACATUA, PSITTACIFORMES)

Dwi Astuti (Division of Zoology, Research Center for Biology, Indonesian Institute of Sciences)
Sri Sulandari (Division of Zoology, Research Center for Biology, Indonesian Institute of Sciences)



Article Info

Publish Date
30 Dec 2010

Abstract

Performance of nucleotide sequencing of 807-bp segments of mitochondrialc cytochrome oxidase I (COI) was analyzed to study the relationship and grouping ofsix species of white cockatoos: Cacatua galerita, C. sulphurea, C. alba, C. moluccensis,C. sanguinea, and C.goffini. Two species (Aprosmictus erythropterus and Prioniturusplaturnus) were used as outgroups in this study. The sequences contained a meancomposition of 25.9 % tymine, 30.8 % cytosine, 26.0 % adenine, and 17.4 % guanine.Based on Kimura 2-parameter analyses, the genetic distance between individuals withina species (intraspecific) ranged from 0.0000 (C. alba) to 0.0026 ± 0.0012 (C. galerita)and the genetic distance between individuals of different species ranged from 0.0299± 0.0057 (C. sulphurea vs C. galerita) to 0.0991 ± 0.0120 (C. moluccensis vs C.sanguinea). Sequence variations and haplotypes were found in Cacatua. In total, 196(%) variable sites were identified with 189 sites being parsimoniously informative.Neighbor-joining (NJ) and maximum parsimony (MP) analyses showed two maingroups in Cacatua: (C. sanguinea + C. goffini), and (C. alba + C. moluccensis) + (C.galerita + C. sulphurea).

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Journal Info

Abbrev

treubia

Publisher

Subject

Description

Treubia is a scientific journal on zoology of the Indo-Australian Archipelago. We publish original research papers, review articles and case studies focused on animal systematics, animal ecology, and wildlife conservation, encompassing the Indo-Australian region. Animal systematics - New species ...