UNP Journal of Statistics and Data Science
Vol. 4 No. 3 (2026): UNP Journal of Statistics and Data Science

Hierarchical Bayesian Modeling with IAR Hexagonal Grids for Reconstructing Incomplete OD Matrices

Eko Primadi Hendri (Politeknik Transportasi Darat Indonesia - STTD)
Sarah Fadhlia (Universitas Indraprasta PGRI)
Edi Santosa (Politeknik Transportasi Darat Indonesia - STTD)
Rachmat Sadili (Politeknik Transportasi Darat Indonesia - STTD)
Sudirman Anggada (Politeknik Transportasi Darat Indonesia - STTD)



Article Info

Publish Date
31 Aug 2026

Abstract

Extracting Origin-Destination (OD) matrices in open Bus Rapid Transit systems such as Transjakarta is essential for urban mobility analysis. However, this process is often hindered by incomplete observations, particularly due to missing tap-out data, which leads to extreme sparsity, zero-inflation, and overdispersion in the resulting matrices. This study addresses the problem of probabilistically reconstructing highly sparse OD matrices while accounting for spatial dependencies. To overcome limitations in previous imputation methods—such as ignoring network topology or being affected by the Modifiable Areal Unit Problem (MAUP)—this research proposes a hierarchical Bayesian approach integrating an Intrinsic Autoregressive (IAR) prior within an isotropic hexagonal (H3) tessellation framework. A Negative Binomial distribution is employed to model overdispersed count data, while latent spatial intensities and missing destinations are jointly estimated using Markov Chain Monte Carlo (MCMC). The proposed Spatial IAR model achieves stable convergence with a maximum , whereas the independent non-spatial model fails to converge adequately ( ). Although the independent model produces lower WAIC and LOOIC values (14313.41 and 14313.66) than the Spatial IAR model (14551.88 and 14611.18), the indicates that the apparent predictive superiority is spurious due to inferential instability. Posterior Predictive Checks further confirm that the spatial model successfully reproduces the overdispersion and zero-inflation characteristics of the observed mobility data. Overall, the results demonstrate that spatial regularization is essential for reconstructing high-dimensional sparse urban mobility data and improving the robustness of transportation mobility analysis.

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Journal Info

Abbrev

ujsds

Publisher

Subject

Computer Science & IT Decision Sciences, Operations Research & Management Mathematics Social Sciences

Description

UNP Journal of Statistics and Data Science is an open access journal (e-journal) launched in 2022 by Department of Statistics, Faculty of Science and Mathematics, Universitas Negeri Padang. UJSDS publishes scientific articles on various aspects related to Statistics, Data Science, and its ...