Chimica et Natura Acta
Vol 14, No 2 (2026)

In Silico Analysis of Momordica charantia Triterpenoids as Adenosine Monophosphate-Activated Protein Kinase Ligands for Type 2 Diabetes Mellitus Therapy

Zafaron, Tiyanto Dwi (Unknown)
Puspitasari, Anita Dwi (Unknown)



Article Info

Publish Date
07 Sep 2026

Abstract

Type 2 diabetes mellitus continues to rise and calls for safe therapeutic leads. This study assessed the potential of triterpenoids from bitter melon (Momordica charantia) as AMP-activated protein kinase (AMPK) ligands at the ATP-binding site through an in silico approach. AMPK (PDB ID: 4QFG) was prepared in YASARA; nine M. charantia triterpenoids and metformin were docked in PLANTS. Redocking of staurosporine validated the protocol (RMSD 0.2376 Å; ≤2.0 Å). Kuguacin J (-89.9934), Karavilagenin B (-86.4084), and Kuguacin R (-85.8514) yielded lower (more favorable) docking scores than metformin (-56.5325) and interacted with hinge residues (Val96 and Glu94/Glu100). As expected, the co-crystallized ligand (staurosporine) showed the most favorable docking score and served as an internal benchmark for pocket definition. Kuguacin J and Kuguacin R fulfilled Lipinski's Rule of Five, whereas Karavilagenin B showed one logP violation. All three compounds demonstrated high predicted intestinal absorption, were predicted as AMES-negative, non-inhibitors of CYP2D6, and potential CYP3A4 substrates. These findings identify the three triterpenoids as promising AMPK ligand candidates warranting further experimental validation.

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Journal Info

Abbrev

jcena

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Chemistry Environmental Science Materials Science & Nanotechnology

Description

Chimica et Natura Acta diterbitkan oleh Departemen Kimia, FMIPA, Universitas Padjadjaran tiga kali setiap tahun pada bulan April, Agustus dan Desember. Artikel yang dimuat mencakup Kimia Analisis dan Pemisahan, Kimia Material, Kimia Energi dan Lingkungan, Kimia Organik Bahan Alam dan Sintesis, ...