SMARTICS Journal
Vol 12 No 2 (2026): SMARTICS Journal (Oktober 2026)

Pengaruh ANOVA F-score terhadap Performa dan Interpretabilitas XGBoost untuk Prediksi Penyakit Jantung

Ubaidillah Ubaidillah (Universitas Sumatera Selatan)
Muhammad Taufik Roseno (Universitas Sumatera Selatan)
Hadi Syaputra (Universitas Sumatera Selatan)



Article Info

Publish Date
03 Nov 2026

Abstract

Heart disease remains a major health problem and has encouraged the use of machine learning for data-driven prediction. This study investigates the effect of ANOVA F-score feature selection on the predictive performance and interpretability of XGBoost using the UCI Heart Disease Cleveland subset with 303 observations and 13 predictor features. Two scenarios were evaluated: XGBoost using all features and XGBoost using features selected by ANOVA F-score. Model evaluation employed nested stratified cross-validation with 10 outer folds and 5 inner folds, while hyperparameter optimization was performed using Optuna with 100 trials. XGBoost using all features achieved an accuracy of 0.8346 ± 0.0684, an F1-score of 0.8149 ± 0.0759, and a ROC-AUC of 0.9020 ± 0.0447. XGBoost with ANOVA F-score achieved an accuracy of 0.8149 ± 0.0532, an F1-score of 0.7948 ± 0.0527, and a ROC-AUC of 0.9033 ± 0.0381. Feature selection reduced the transformed input space from 22 to an average of 17.8 features, equivalent to a 19.09% reduction. The Wilcoxon signed-rank test showed no statistically significant performance differences at the 0.05 significance level. SHAP analysis identified cp, ca, thal, slope, and oldpeak as the dominant features in both models. Overall, ANOVA F-score produced a more compact feature representation while preserving the main interpretability pattern, but did not significantly improve XGBoost predictive performance.

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Journal Info

Abbrev

jst

Publisher

Subject

Computer Science & IT Control & Systems Engineering Decision Sciences, Operations Research & Management Electrical & Electronics Engineering

Description

SMARTICS Journal's aims is to disseminate research on applied computer science or information technology by publishing the original articles. The scope of SMARTICS are electrical, electronics, controls, information system, and applied ...