Journal of Electronics, Electromedical Engineering, and Medical Informatics
Vol 8 No 4 (2026): October

Segmentation of Acute Ischemic Stroke Infarct using Multi-scale U-Net Architecture on Non-contrast CT Scan Images

Osmalina Rahma (Biomedical Engineering, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia)
Aisyah Widayani (Radiology Imaging Technology, Department of Health, Faculty of Vocational Studies. Universitas Airlangga, Surabaya, Indonesia)
Nimas Maharani Putri (Biomedical Engineering, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia)
Rifai Chai (Department of Engineering Technologies, School of Science, Computing and Engineering Technologies, Swinburne University of Technology, Australia)



Article Info

Publish Date
31 Oct 2026

Abstract

Acute ischemic stroke must be treated within a few hours, and the first scan is usually a non-contrast CT (NCCT), on which an early infarction is often hard to see. Automatic segmentation assist image interpretation, and multi-scale convolution is a commonly proposed approach. This study measured how much such a block improves U-Net performance for this task, and what it costs. Every convolutional block of U-Net, in the encoder and the decoder, was replaced by a block with three parallel branches using 1×1, 3×3 and 5×5 kernels. Both networks were trained on the public Acute Ischemic Stroke Dataset, on 375 studies with supratentorial infarcts. The data were divided by study; the scans of the dataset’s own test split were kept for testing, and augmentation was applied to the training subset alone. Four configurations were compared: each architecture with and without augmentation. On the 51 test patients, Multi-scale U-Net did not improve overlap. Its Dice score was 0.6372 against 0.6632 for U-Net with augmentation, and the paired difference per patient was 0.0233 in favour of U-Net (95 % CI −0.060 to 0.013, p = 0.19). The multi-scale block instead altered the balance between the two types error: sensitivity increased by 0.060 (p = 0.002), and precision decreased by 0.100 (p < 0.001). Augmentation improved both networks (+0.106 and +0.048 Dice per patient, p < 0.001), mainly by cutting false-positive lesions from 15.5 to 5.6 per patient. The multi-scale block costs 2.31 times as many parameters and 3.37 times as much inference time. An ablation over the target definition favoured the dataset authors' labels: adding the label for infarct invisible on NCCT cost 0.040 Dice and tripled false-positive lesions. Both networks segment small infarcts poorly, with Dice below 0.16 under 100 pixels, which remains the main obstacle.

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Journal Info

Abbrev

jeeemi

Publisher

Subject

Computer Science & IT Control & Systems Engineering Electrical & Electronics Engineering Engineering

Description

The Journal of Electronics, Electromedical Engineering, and Medical Informatics (JEEEMI) is a peer-reviewed open-access journal. The journal invites scientists and engineers throughout the world to exchange and disseminate theoretical and practice-oriented topics which covers three (3) majors areas ...