Baso Manguntungi
Department of Biotechnology, Faculty of Biotechnology, Universitas Teknologi Sumbawa. Jl. Raya Olat Maras, Moyo Hulu, Sumbawa 84371, West Nusa Tenggara, Indonesia

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Biodiversity of Enterobacteriaceae on masin (fermented sauce) from Sumbawa, West Nusa Tenggara, Indonesia Baso Manguntungi; Dinar Saputri; Chairul Afgani; Apon Mustopa; Fatimah; Amirin Kusmiran
Biodiversitas Journal of Biological Diversity Vol. 21 No. 3 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210320

Abstract

Abstract. Manguntungi B, Saputri DS, Afgani CA, Mustopa AZ, Fatimah, Kusmiran A. 2020. Biodiversity of Enterobacteriaceae on masin (fermented sauce) from Sumbawa, West Nusa Tenggara, Indonesia. Biodiversitas 21: 1001-1006. Masin is fermented sauce originating from Sumbawa, West Nusa Tenggara which is made from raw shrimp with the addition of tamarind, salt, and fingerroot (Boesenbergia pandurata) flower. The study aimed to determine the biodiversity of pathogenic bacteria, especially Enterobacteriaceae family in Masin. The methods used in this study were isolation of bacteria using MRS media with modified NaCl concentration (1-12%) and molecular identification by using PCR-RAPD (randomly amplified polymorphic DNA) analysis and 16S ribosomal RNA-based sequencing analysis. The characteristics of bacteria that were successfully isolated on media with various concentrations of salt were round, milky white, and formed a flat edge with convex elevation in each colony. The highest bacterial population was 29.65 x 106 CFU/g in MRS + NaCl 7% treatment. From 48 selected isolates that morphologically close to Enterobacteriaceae family, 5 isolates were chosen for sequencing analysis. Based on the phylogenetic analyses, isolate 01 had a close kinship with Leclercia adecarboxylata, isolate 11 had a close kinship with Citrobacter freundii, isolate 33 had a close kinship with Enterobacter cloacae, isolate 40 had a close kinship with Pantoea agglomerans and isolate 46 had a close kinship with Enterobacter ludwigii.
Diversity analysis, identification, and bioprospecting of Lactic Acid Bacteria (LAB) isolated from Sumbawa horse milk KHADIJAH ALLIYA FIDIEN; Baso Manguntungi; LINDA SUKMARINI; APON ZAENAL MUSTOPA; LITA TRIRATNA; FATIMAH FATIMAH; KUSDIANAWATI KUSDIANAWATI
Biodiversitas Journal of Biological Diversity Vol. 22 No. 6 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220639

Abstract

Abstract. Fidien KA, Manguntungi B, Sukmarini L, Mustopa AZ, Triratna L, Fatimah, Kusdianawati. 2021. Diversity analysis, identification, and bioprospecting of Lactic Acid Bacteria (LAB) isolated from Sumbawa horse milk. Biodiversitas 22: 3333-3340. Sumbawa horse milk has a probiotic potential because of the presence of Lactic Acid Bacteria (LAB). The LAB present in Sumbawa horse milk has been reported to have antimicrobial activities against pathogenic bacteria, including Staphylococcus epidermidis, Staphylococcus aureus, Escherichia coli, and Vibrio cholerae. However, the potential of LAB from Sumbawa horse milk as antioxidant and antidiabetic is still unexplored. Studies related to the diversity of indigenous bacteria in Sumbawa horse milk based on metagenomic analysis have not been widely studied either. Therefore, this study aimed to determine the diversity of species of indigenous bacteria in Sumbawa horse milk and to identify LAB bioprospecting from Sumbawa horse milk. The diversity of indigenous bacterial species was investigated by the 16S rRNA gene-targeted metagenomic approach from bacterial DNA isolated from Sumbawa horse milk. The identification of LAB was also carried out by the 16S rRNA gene identification method. LAB bioprospecting on antioxidant activity was determined using the DPPH method, while the antidiabetic activity was measured using the ?-glucosidase inhibition assay. The diversity analysis of indigenous bacteria based on 16S rRNA gene-based metagenomic revealed at least 7 phyla were relatively abundant in Sumbawa horse milk. The greatest abundance was shown by the phylum Proteobacteria (0.641%) and Firmicutes (0.327%). Enterococcus durans (39.01%) was the species that had the highest abundance in Sumbawa horse milk, followed by Lactococcus garvieae (30.13%) and Lactococcus lactis (19.85%). Moreover, based on the identification of the 16S rRNA gene, eight LAB isolates had similarities to bacterial strains, including Enterococcus faecium DSM 20477, E. faecium NBRC 100486, E. faecium ATCC 19434, E. durans 98D, E. faecalis ATCC 19433, E. faecalis NRBC 100480, Lactococcus lactis subsp. hordniae NBRC 100931 and L. garvieae JCM 10343 with similarity levels of more than 98%. In terms of LAB bioprospecting, the antioxidant assay showed the highest DPPH radical binding activity by L. garvieae L.22PR (43%). Meanwhile, the highest inhibitory activity of ?-glucosidase was shown by E. faecium G.6PR (45%).