RULLY ADI NUGROHO
Faculty of Biology, Universitas Kristen Satya Wacana. Jl. Diponegoro 52-60, Salatiga 50711, Central Java, Indonesia

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Isolation and identification of Cr-resistant bacteria from the rhizosphere of Tagetes sp. and their ability to reduce Cr(VI) VINCENTIA IRENE MEITINIARTI; ELSA KRISTIANI PUTRI; ATHALIA EUGENIA RUNTU; RULLY ADI NUGROHO; SRI KASMIYATI
Biodiversitas Journal of Biological Diversity Vol. 23 No. 8 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230832

Abstract

Abstract. Meitiniarti VI, Putri EK, Runtu AE, Nugroho RA, Kasmiyati S. 2022. Isolation and identification of Cr-resistant bacteria from the rhizosphere of Tagetes sp. and their ability to reduce Cr(VI). Biodiversitas 23: 4118-4124. Bioremediation involving the interaction of plants with microorganisms is a technique for improving the environment polluted with chromium hexavalent [Cr(VI)]. Marigolds (Tagetes sp.) are known to be a hyperaccumulator plant for Cr(VI) and there are microbes in its rhizosphere that enable the plant tolerant to heavy metals. The aims of this study were to isolate and identify indigenous rhizobacteria resistant to Cr(VI) from Tagetes sp. and to test the ability of these bacterial isolates to reduce Cr(VI). Three isolates of Cr(VI) resistant bacteria were obtained in this study, namely Micrococcus luteus RT-9, Stenotrophomonas maltophilia RT-12, and Brevundimonas sp. RT-23. M. luteus RT-9 and S. maltophilia RT-12 which were resistant to Cr(VI) 100 mg L-1 and their mixture were tested for their ability to reduce Cr(VI) in a liquid medium. Microbacterium sp. SpR3 obtained by the previous study was used as a reference. The results showed that the isolate of S. maltophilia RT-12 had a higher ability (2.2 mg L-1 h-1) than M. luteus RT-9 (0.9 mg L-1 h-1). S. maltophilia RT-12 had the ability to reduce Cr(VI) similar to Microbacterium sp. SpR3. The mixed inoculation of M. luteus RT-9, S. maltophilia RT-12, and Microbacterium sp. SpR3 did not show a difference in the reduction ability of Cr (VI) compared to pure cultures.
Identification and production of indole-3-acetic acid by bacteria isolated from eco-enzymes V. IRENE MEITINIARTI; SRI KASMIYATI; EZRA EZRA; RULLY ADI NUGROHO; AGNA S. KRAVE
Biodiversitas Journal of Biological Diversity Vol. 26 No. 1 (2025)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d260112

Abstract

Abstract. Meitiniarti VI, Kasmiyati S, Nugroho RA, Krave AS. 2025. Identification and production of indole-3-acetic acid by bacteria isolated from eco-enzymes. Biodiversitas 26: 111-117. Phytohormone-producing microorganisms are an essential component of biofertilizers. One example of a phytohormone is Indole Acetic Acid (IAA). IAA-producing microorganisms can be originated from various habitats. In this study, IAA-producing bacteria will be isolated from eco-enzyme, a liquid-fermented organic material rich in benefits and contains numerous microorganisms and IAA. The research involves processes of isolation, detection of cell and IAA production, and molecular identification. Through the processes of isolation and purification, 14 bacterial isolates were obtained. After testing their ability to produce IAA using a medium containing L-tryptophan and Salkowski's reagent, only 11 isolates were found to produce IAA. The DNA of these 11 isolates was isolated, amplified, sequenced, and identified through molecular analysis. The nucleotide sequences of these 11 bacterial isolates have been registered in the gene bank and assigned accession numbers PQ095569 to PQ095579. Based on alignment and phylogenetic tree analysis, the 11 isolates were grouped into three categories: the Bacillus group, consisting of Bacillus altitudinis, Bacillus subtilis, Bacillus licheniformis, Priestia megaterium, and Paenibacillus sp.; lactic acid bacteria, including Lacticaseibacillus paracasei and Lactiplantibacillus plantarum; and vibrio-shaped bacteria, including Vibrio sp. and Vibrio diazotrophicus. The Bacillus group (including Paenibacillus megaterium) could produce high levels of IAA. However, among the members of this group, P. megaterium exhibited the highest cell production capability and IAA production, with values of 2982.208 mg·L?¹ and 35.49 mg·L?¹, respectively. This high growth ability and IAA production make P. megaterium a promising candidate as an inoculum for use as a PGPR (Plant Growth-Promoting Rhizobacterium).
Home-made and commercial eco-enzymes alter plankton communities and water chemistry in Rawa Pening Lake, Central Java, Indonesia SUSANTI PUDJI HASTUTI; SUCAHYO SUCAHYO; DESTI CHRISTIAN CAHYANINGRUM; RULLY ADI NUGROHO
Biodiversitas Journal of Biological Diversity Vol. 26 No. 8 (2025)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d260816

Abstract

Abstract. Hastuti SP, Sucahyo, Cahyaningrum DC, Nugroho RA. 2025. Home-made and commercial eco-enzymes alter plankton communities and water chemistry in Rawa Pening Lake, Central Java, Indonesia. Biodiversitas 26: 3843-3854. Eco-enzymes are increasingly used to improve water quality by reducing organic pollutants and balancing nutrient levels in rivers and other aquatic systems. However, their typically low pH and high concentrations of organic matter may increase Biological Oxygen Demand (BOD) and acidify the water, potentially altering freshwater plankton species composition and increasing the risk of eutrophication in aquatic ecosystems. This study aimed to assess the effects of commercial and home-made eco-enzyme on freshwater plankton community structure and water quality parameters using a controlled aquaria design with four concentrations (2.5-20% v/v). Controls without eco-enzymes were included for comparison. Key parameters including nutrient levels, BOD, Total Dissolved Solids (TDS), pH, plankton diversity and abundance were monitored throughout the study. Plankton diversity across different eco-enzyme types and concentrations was compared by generating diversity profiles using Renyi’s entropy values. Results showed that both types of eco-enzymes significantly altered water chemistry. BOD declined rapidly at 5% commercial and 2.5% (v/v) home-made eco-enzyme, while pH increased from 7.4 to 8.6 over time. Ammonia, nitrite, nitrate, and TDS levels rose with both eco-enzyme concentration and duration. At higher concentrations, commercial eco-enzymes promoted the dominance of Bacillariophyta and Cyanophyta, while home-made eco-enzymes favored Bacillariophyta and Chlorophyta. Although eco-enzymes stimulated microbial activity and organic matter decomposition, they also supported the growth of pollution-tolerant plankton species, potentially reducing overall biodiversity. Renyi entropy profiles revealed decreased richness and evenness, especially at higher concentrations. These results highlight that while eco-enzymes can contribute to water quality improvement, their ecological impacts, particularly on plankton communities, must be carefully considered. Further research is necessary to ensure their sustainable and responsible use in aquatic ecosystems.