ISMOYOWATI ISMOYOWATI
Faculty of Animal Science, Universitas Jenderal Soedirman. Jl. Dr. Soeparno No. 60, Banyumas 53122, Central Java, Indonesia

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Genetic variability of IGF1 and IGF2 and correlation to body weight in Kedu chicken of Indonesia ROSIDI ROSIDI; IMAM SUSWOYO; SIGIT MUGIYONO; ISMOYOWATI ISMOYOWATI; ELLY TUGIYANTI
Biodiversitas Journal of Biological Diversity Vol. 25 No. 12 (2024)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d251220

Abstract

Abstract. Rosidi, Suswoyo I, Mugiyono S, Ismoyowati, Tugiyanti E. 2024. Genetic variability of IGF1 and IGF2 and correlation to body weight in Kedu chicken of Indonesia. Biodiversitas 25: 4846-4852. This study aims to examine differences in genetic variability using Insulin Growth Factors (IGF) to estimate the body weight of selected Kedu chickens. A total sample 37 chickens consist of 10 White Kedu, 10 Cemani Kedu, 10 Red Kedu, 5 Black Tongue Kedu, 1 Blorok Kedu, and 1 Lurik Walik Kedu. Next, their blood is taken from the chicken samples and analyzed in the laboratory. The identification of the IGF-1 and IGF-2 genes polymorphism was done by PCR and sequencing methods. The results showed two Single Nucleotide Polymorphism (SNP) of IGF1: c.166 T>A and c.169 A>G and IGF2: c.248 G>A and c.540 C>T. The frequency of genotypes was informed on GG, GA and AA with values of 0.71, 0.1 and 0.19, respectively. The base pair of 540 showed the existence of genotypes CC, CT and TT with values of 0.28, 0.62, and 0.1 respectively. The value of heterozygosity obtained at each base pair was c. 248 and the heterozygosity value was 0.3648, while the heterozygosity value of c. 540 was 0.4838. The correlation analysis showed that at c. 248 had a value of 0.57, which was relatively greater than that at c. 540, namely 0.15. The c. 248 genotypes of AA had greater body weight than the rest. In conclusion, AA genotypes in the IGF-1 and IGF-2 genes had a relatively high body weight compared to that of other genotypes, but IGF-1 had a relatively low association (correlation), so incompatible as a marker for future selection. An IGF marker can be used to estimate the body weight of the upcoming offspring of Kedu chickens.
Genetic variability analysis of indigenous Indonesian chickens and Hy-Line Brown using mitochondrial DNA D-Loop HV1 region ORIZA PRABA ALBANI; ISMOYOWATI ISMOYOWATI; HERMAWAN SETYO WIDODO; SRI RAHAYU; DATTA DEWI PURWANTINI
Biodiversitas Journal of Biological Diversity Vol. 26 No. 5 (2025)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d260549

Abstract

Abstract. Albani OP, Ismoyowati, Widodo HS, Rahayu S, Purwantini DD. 2025. Genetic variability analysis of indigenous Indonesian chickens and Hy-Line Brown using mitochondrial DNA D-Loop HV1 region. Biodiversitas 26: 2540-2547. Genetic diversity plays a very significant role in the context of sustainable farming and food security. Indonesia is known for its diverse local chicken populations, whose genetic profile reflects their adaptation to the environments in which they live, as well as the various natural selection and breeding factors that differ from one region to another. Therefore, this research was carried out with the aim of knowing the genetic diversity and evolutionary origin of three Indonesian native chickens, namely Kedu Merah, Kampung, and Sentul chicken, based on mtDNA D-Loop sequences and compared it with a commercial stock of Hy-Line Brown laying hens. A total of 160 chickens, consisting of 40 chickens from each population, are analyzed using the PCR-SSCP technique, with the polymorphic results further sequenced. The result showed there are 9 haplotypes distributed across populations, with the Kedu Merah being the most diverse population (He = 0.624) and Hy-Line Brown being the least diverse (He = 0.219). Sequencing revealed that there are at least 19 polymorphic sites distributed along 167 bp of the HV1 region of the D-loop mtDNA sequence. Evolutionary analysis was performed by comparing the sequenced DNA with references from each chicken clade, and the result showed that Kedu Merah, Kampung, and Sentul chicken has a single maternal origin and belong to clade E, which can be traced back to the Indian subcontinent.