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Variation of Interleukin-8 (IL-8) Receptor Gene Based on Single Strand Conformation Polymorphism (SSCP) in Indonesian Friesian Holstein Dairy Cattle Winaya, A; Rahayu, ID
ANIMAL PRODUCTION Vol 12, No 2 (2010): May
Publisher : Universitas Jenderal Soedirman, Faculty of Animal Science, Purwokerto-Indonesia

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Abstract

Interleukin-8 (IL-8) receptor gene is response to bacterial invasion, endothelial and epithelial cells by release the chemokine interleukin-8 (IL-8). IL-8 mediates neutrophil function, allowing neutrophils to resolve bacterial infections by migrating through blood vessel walls and to the site of infection. IL-8 also impacts neutrophil killing and survival ability during the inflammatory response.  Genes that associated with neutrophil function also has potency as a genetic marker for mastitis disease, the migration of neutrophil from blood to infections side is essentially to detect the mastitis pathogen in general. It has been known that mastitis disease was the major problem in dairy cattle industry since influencing the milk quality, especially in bacterial content. The aim of this research is to detect the variation of IL-8 receptor gene in Indonesian Frisien Holstein (FH) dairy cattle which keep by farmer at Pujon District of Malang Regency.  DNA genom was extracted from whole blood cells by standart phenol-chloroform methods.  PCR reaction was done by using genomic DNA as a template while primer was the set of nucleotide that flanking IL-8 receptor gene. Polymorphism analysis of IL-8 receptor gene was based on number and frequency of SSCP (Single Strand Conformation Polymorphism) pattern of  PCR products.  From research result showed that was found five patterns of SCCP from IL-8 receptor gene of Indonesian FH which came from Pujon District, Malang Regency.  This is also illustrated that of IL-8 receptor gene of Indonesian FH dairy cattle was enough polymorphism.  The number pattern of SSCP-1 and SSCP-2 were found higher than others.  Also, those patterns less than 50 % of samples were suspected as sub clinical mastitis. It means that this preliminary study showed that SSCP-1 and SSCP-2 patterns could be as a candidate marker for mastitis resistance of Indonesian FH dairy cattle. While others patterns could be used in determination of IL-8 receptor gene polymorphism of Indonesian FH dairy cattle based on SCCP patterns.  This is important because we need this data for completing the genetic variation of Indonesian cattle data base. (Animal Production 12(2): 118-123 (2010)Key Words : IL-8 gene, mastitis, SSCP, chemokine, Friesian Holstein
The Genetic Variation of Bali Cattle (Bos javanicus) Based on Sex Related Y Chromosome Gene Winaya, A; Rahayu, ID; Amin, M; Herliantin, Herliantin
ANIMAL PRODUCTION Vol 13, No 3 (2011): September
Publisher : Universitas Jenderal Soedirman, Faculty of Animal Science, Purwokerto-Indonesia

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Abstract

Bali cattle is very popular Indonesian local beef related to their status in community living process of farmers in Indonesia, especially as providers of meat and exotic animal. Bali cattle were able to adapt the limited environment and becoming local livestock that existed until recently.  In our early study by microsatellites showed that Bali cattle have specific allele. In this study we analyzed the variance of partly sex related Y (SRY) gene sequence in Bali cattle bull as a source of cement for Artificial Insemination (AI).  Blood from 17 two location of AI center, Singosari, Malang and Baturiti, Bali was collected and then extracted to get the DNA genome.  PCR reaction was done to amplify partially of SRY gene segment and followed by sequencing PCR products to get the DNA sequence of SRY gene. The SRY gene sequence was used to determine the genetic variation and phylogenetic relationship.  We found that Bali cattle bull from Singosari has relatively closed genetic relationship with Baturiti. It is also supported that in early data some Bali bulls of Singosari were came from Baturiti. It has been known that Baturiti is the one source of Bali cattle bull with promising genetic potential. While, in general that Bali bull where came from two areas were not different on reproductive performances. It is important to understand about the genetic variation of Bali cattle in molecular level related to conservation effort and maintaining the genetic characters of the local cattle. So, it will not become extinct or even decreased the genetic quality of Indonesian indigenous cattle. Key Words : Bali cattle, SRY gene, artificial insemination, phylogenetic, allele Animal Production 13(3):150-155 (2011)