International Journal of Agriculture System
VOLUME 10 ISSUE 2, DECEMBER 2022

Comparison of DNA Isolation Methods that Derived from Leaves of a Potential Anti-Cancer Rodent Tuber (Typhonium flagelliforme) Plant

Gemilang Rahmadara (Research Center for Genetic Engineering, OR HL, BRIN, KST Soekarno, Jl. Raya Jakarta-Bogor Km 46, Cibinong 16911)
Nurul Fitri Hanifah (Research Center for Genetic Engineering, OR HL, BRIN, KST Soekarno, Jl. Raya Jakarta-Bogor Km 46, Cibinong 16911)
Rismayanti Rismayanti (Research Center for Genetic Engineering, OR HL, BRIN, KST Soekarno, Jl. Raya Jakarta-Bogor Km 46, Cibinong 16911)
Devit Purwoko (Research Center for Genetic Engineering, OR HL, BRIN, KST Soekarno, Jl. Raya Jakarta-Bogor Km 46, Cibinong 16911)
Andi Rochandi (Directorate of Laboratory Management, Research Facilities, and Science and Technology Park, DIRI, BRIN, KST Habibie, Serpong, Tangerang Selatan 15314)
Teuku Tajuddin (Unknown)



Article Info

Publish Date
27 Dec 2022

Abstract

The content of polysaccharides, polyphenols, proteins, and RNA compounds is the main problem often found in Plants DNA isolation, which inhibit the process of DNA isolation. Comparing the methods of plant DNA isolation is necessary for obtaining the DNA with good quality, purity, high concentration and efficiency time and cost. This study aimed to determine the best DNA isolation method that derived from leaves of a potential anti-cancer Rodent Tuber (Typhonium flagelliforme) plant by comparing the conventional DNA isolation method (cetyl trimethyl ammonium bromide/CTAB) and 2 commercial kits (Promega Wizard™ Genomic DNA Purification Kits, and Geneaid Genomic Mini Kit). The results showed that the CTAB method yielded a higher amount of DNA (>100 ng/µL) at the cost of 0.49 USD per sample, in comparison with Promega method (69.19 to 157.68 ng/µL) at 3.28 USD per sample and Geneaid method (8.15 to 18.52 ng/µL) at 2.06 USD per sample. Based on the purity of isolated DNA (A260/280), CTAB method produced relatively similar DNA quality to Promega kit (1.8-2.0). On the other hand, Geneaid method resulted in a lower purity value at 1.15 to 1.60.

Copyrights © 2022






Journal Info

Abbrev

ijas

Publisher

Subject

Agriculture, Biological Sciences & Forestry

Description

International Journal of Agriculture System (Int. J. Agr. Syst.- IJAS) is published by Hasanuddin University (UNHAS) twice a year in June and December. This journal is an academic, citation indexed, and blind peer-reviewed journal. It covers original research articles, short notes and ...