Dinamika Pertanian
Vol. 34 No. 2 (2018): Jurnal Dinamika Pertanian Edisi Agustus 2018

OPTIMASI SUHU ANNEALING UNTUK AMPLIFIKASI GEN AKTIN PADA PANDAN (Pandanus sp)

Larissa Anggisti (Universitas Riau)
Dewi Indriyani Roslim (Universitas Riau)
Herman (Universitas Riau)



Article Info

Publish Date
05 Aug 2020

Abstract

ABSTRACT Genes expression information involved in Pandanus sp. adaptation in Kajuik Lake sp. to environmental stress is unknown. The genes expression analysis requires the internal control gene such as actin. Actin gene is one of the genes that can be expressed continuously at all stages of plant development. Before obtaining genetic information, it is necessary to isolate and amplify DNA. The purpose of this study was to determine the annealing temperature for actin gene amplification in Pandan (Pandanus sp.). The DNA amplification uses two primer pairs with 20 annealing temperatures. The annealing temperatures were calculated based on the mean values of Tm which were then reduced and added with 5, 4, 3, 2 and 1. The annealing temperature of 53.4 ºC (Tm +1) yielded single thick clear using. The annealing temperature of 53.4 ºC (Tm +1) using P_act_F / P_act_R1 primer pair yielded single, thick and firm DNA band. It was concluded that the annealing temperature for actinin gene amplification in Pandanussp was 53.4 ºC with primer P_act_F / P_act_R1. Keywords: Actin gene, Annealing temperatures, PCR

Copyrights © 2018






Journal Info

Abbrev

dinamikapertanian

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Chemistry Economics, Econometrics & Finance Immunology & microbiology

Description

Dinamika Pertanian is a scientific journal published by the Faculty of Agriculture Islam University of Riau Pekanbaru three times a year (April August and December). Journal publishes new articles and original research on topics related to agriculture broadly. This journal accommodates articles ...