Science and Technology Indonesia
Vol. 9 No. 2 (2024): April

Modification of Indonesian Kaolinite-Based Silica Coarse (SC) for RNA Extraction Method of SARS-CoV-2

Marintan, Marchia Marthalena (Unknown)
Sjatha, Fithriyah (Unknown)
Nurani, Dita Arifa (Unknown)
Krisnandi, Yuni Krisyuningsih (Unknown)
Sariman, Sariman (Unknown)



Article Info

Publish Date
02 Apr 2024

Abstract

One of the strategies to overcome the COVID-19 disease is through rapid diagnostic tests using the Reverse-Transcriptase Polymerase Chain Reaction (RT-PCR) test. The RT-PCR test is a detection and quantification test of nucleic acids, initiated by the pre-analytical step of purification of the nucleic acids. Purification of nucleic acid requires silica-based materials as a solid phase-extraction matrix or column. Herein, Silica Coarse (SC) in the form of suspension and powder columns; was prepared from natural Indonesian Kaolinite as an alternative extraction column to binding RNA of SARS-CoV-2. The RNA binding and releasing ability in SC was enhanced with the support of chaotropic agents in the form of Na+ and Guanidium+ as charged balancing cations, embedded in the silicate layer inside the kaolinite framework. SC, which has been supported with Na+ and Guanidium+ respectively, then studied its physicochemical characteristics using FTIR spectroscopy, X-ray diffraction technique, scanning electron microscopy, and BET surface area and pore size measurement. This work shows that the modified SC suspension column could extract RNA of SARS-CoV-2 that amplified better in the RT PCR test than SC powder columns, with the initial Ct value of all the SARS-CoV-2 specimens in the range < 20.

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Journal Info

Abbrev

JSTI

Publisher

Subject

Biochemistry, Genetics & Molecular Biology Chemical Engineering, Chemistry & Bioengineering Environmental Science Materials Science & Nanotechnology Physics

Description

An international Peer-review journal in the field of science and technology published by The Indonesian Science and Technology Society. Science and Technology Indonesia is a member of Crossref with DOI prefix number: 10.26554/sti. Science and Technology Indonesia publishes quarterly (January, April, ...