Bulletin of Applied Mathematics and Mathematics Education
Vol. 5 No. 1 (2025)

Pipeline on microarray data analysis: Pre-processing

Fajriyah, Rohmatul (Unknown)
Kongchouy, Noodchanath (Unknown)
Ayudhaya, Wanvisa Saisanan Na (Unknown)
Yotenka, Rahmadi (Unknown)
Danarwindu, Ghiffari Ahnaf (Unknown)

Article Info

Publish Date
18 Jul 2025

Abstract

Bioinformatics is blooming and its data are store in some repository offline and or online. Yet some basic concepts are not fully disseminated. The paper intends to provide the reader with a review of one important concept in the pipeline bioinformatics data analysis of microarray, pre-processing. In pre-processing, there are four steps, background correction, normalization, probe correction and summarization. Each step consists of several methods, and we describe each method to give a better understanding on how it works theoretically. We focused on microarray data from Affymetrix platform with single-color chip.

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Journal Info
Bulletin of Applied Mathematics and Mathematics Education
Website

Abbrev

BAMME

Publisher

Universitas Ahmad Dahlan

Subject

Mathematics

Description

BAMME welcomes high-quality manuscripts resulted from a research project in the scope of applied mathematics and mathematics education, which includes, but is not limited to the following topics: Analysis and applied analysis, algebra and applied algebra, logic, geometry, differential equations, ...