Biodiversitas Journal of Biological Diversity
Vol. 19 No. 5 (2018)

Genetic diversity of mastitis cow’s milk bacteria based on RAPD-PCR

APON ZAENAL MUSTOPA (Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor Km 46, Cibinong, Bogor 16911, West Java, Indonesia.)
INES FERDIANA PUSPITASARI (Department of Biochemistry, Faculty of Mathematics and Natural Sciences, Bogor Agricultural University, Bogor 16680, West Java, Indonesia)
FATIMAH FATIMAH (Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development. Jl. Tentara Pelajar No. 3A, Cimanggu, Bogor 16111, West Java, Indonesia)
LITA TRIRATNA (Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor Km 46, Cibinong, Bogor 16911, West Java, Indonesia.)
GINA KARTINA (Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor Km 46, Cibinong, Bogor 16911, West Java, Indonesia.)



Article Info

Publish Date
21 Sep 2018

Abstract

Mustopa AZ, Puspitasari IF, Fatimah, Triratna L, Kartina G. 2018. Genetic diversity of mastitis cow’s milk bacteria based on RAPD-PCR. Biodiversitas 19: 1714-1721. Mastitis in cow is caused by several pathogenic bacteria, including antibiotic-resistant bacteria. Identification of the pathogenic bacteria’s diversity that is contaminating cow’s milk needs to be done. The aim of this research was to conduct molecular identification in mastitis cow’s milk bacteria through RAPD-PCR (Random Amplified Polymorphism DNA-Polymerase Chain Reaction) analysis. Bacteria from mastitis cow’s milk were enumerated using selective media. Based on the result of media selection, there were 72 isolates of bacteria from mastitis cows in Ciguha, Guranteng, Cikarenceng Village (Pagerageung, Tasikmalaya), and Warnasari Village (Pangalengan, Bandung), West Java, Indonesia. The genomes from these isolates were extracted and then subjected to RAPD-PCR analysis. The results of RAPD-PCR analysis showed 8 clusters of dendrogram which 4 dominant clusters were selected. Identification of 4 dominant clusters, which contained representative strains, using 16s rRNA showed the isolates BPA-12, MHA-6, L-4, and XLDA-8 were identified as Staphylococcus aureus, Escherichia coli, Listeria monocytogenes, and Enterobacter bugandensis.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...