Biodiversitas Journal of Biological Diversity
Vol. 19 No. 6 (2018)

Short Communication: Isolation and identification of actinomycetes potential as the antagonist of Dickeya zeae pineapple soft rot in Lampung, Indonesia

TITIK NUR AENY (Department of Plant Protection, Faculty of Agriculture, Universitas Lampung. Jl. Prof. Soemantri Brojonegoro No. 1 Bandar Lampung 35145, Lampung, Indonesia.)
JOKO PRASETYO (Department of Plant Protection, Faculty of Agriculture, Universitas Lampung. Jl. Prof. Soemantri Brojonegoro No. 1 Bandar Lampung 35145, Lampung, Indonesia.)
RADIX SUHARJO (Department of Plant Protection, Faculty of Agriculture, Universitas Lampung. Jl. Prof. Soemantri Brojonegoro No. 1 Bandar Lampung 35145, Lampung, Indonesia.)
SUSKANDINI R. DIRMAWATI (Department of Plant Protection, Faculty of Agriculture, Universitas Lampung. Jl. Prof. Soemantri Brojonegoro No. 1 Bandar Lampung 35145, Lampung, Indonesia.)
EFRI EFRI (Department of Plant Protection, Faculty of Agriculture, Universitas Lampung. Jl. Prof. Soemantri Brojonegoro No. 1 Bandar Lampung 35145, Lampung, Indonesia.)
AININ NISWATI (Department of Soil Science, Faculty of Agriculture, Universitas Lampung. Jl. Prof. Soemantri Brojonegoro No. 1 Bandar Lampung 35145, Lampung, Indonesia.)



Article Info

Publish Date
09 Oct 2018

Abstract

Aeny TN, Prasetyo J, Suharjo R, Dirmawati SR, Efri, Niswati A. 2018. Isolation and Identification of actinomycetes potential as the antagonist of Dickeya zeae pineapple soft rot in Lampung, Indonesia. Biodiversitas 19: 2052-2058. This study was aimed to collect and identify actinomycetes from the rhizosphere of pineapple with the potency as a biocontrol agent of Dickeya zeae, the pathogen of pineapple soft rot. Soil samples were collected from four different pineapple plantations in Lampung Province, in December 2016. Samples were air-dried, serially diluted, and plated on modified ISP2 medium and several single characterized colonies were sub cultured and purified. The growing colonies were grouped into different colour series based on their aerial-mycelia and substrate-mycelia colors. Antagonistic activity of the actinomycetes isolates were evaluated against Dickeya zeae by agar diffusion method using the same medium agar lawn with the bacterial cultures. Selected antagonistic actinomycete isolates with the biggest clear zone formation were further characterized and identified molecularly based on 16S rDNA sequences. The results showed that as many as 34 actinomycete isolates collected from pineapple rhizosphere produced clear zones. Two isolates, namely GGF2-i5 and GGF4-i18, presented the biggest clear zone were proposed as the potential antagonist strains against D. zeae and identified as Streptomyces parvulus and Streptomyces hygroscopicus subsp. hygroscopicus, respectively. Both of the 16S rRNA gene sequences from those strains were deposited in the GenBank with the accession number MH170279 and MH170280, respectively.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...