Biodiversitas Journal of Biological Diversity
Vol. 19 No. 6 (2018)

Genetic diversity analysis of daluga (Cyrtosperma merkusii) using Sequence-Related Amplified Polymorphism in Siau, Sangihe and Talaud Islands, North Sulawesi, Indonesia

INA ERLINAWATI (Herbarium Bogoriense, Botany Division, Research Center for Biologi, Indonesian Institut of Sciences. Cibinong Science Centre, Jl. Raya Jakarta-Bogor Km. 46, Cibinong, Bogor 16911, West Java, Indonesia.)
ABINAWANTO ABINAWANTO (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Indonesia. Kampus UI Gedung E Level 2, Jl. Lingkar Kampus Raya, Pondok Cina, Beji, Depok 16424, West Java, Indonesia.)
ANDI SALAMAH (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Indonesia. Kampus UI Gedung E Level 2, Jl. Lingkar Kampus Raya, Pondok Cina, Beji, Depok)
RUGAYAH RUGAYAH (Herbarium Bogoriense, Botany Division, Research Center for Biologi, Indonesian Institut of Sciences. Cibinong Science Centre, Jl. Raya Jakarta-Bogor Km. 46, Cibinong, Bogor 16911, West Java, Indonesia.)



Article Info

Publish Date
09 Oct 2018

Abstract

Erlinawati I, Abinawanto, Salamah A, Rugayah. 2018. Genetic diversity analysis of daluga (Cyrtosperma merkusii) using Sequence-Related Amplified Polymorphism in Siau, Sangihe and Talaud Islands, North Sulawesi, Indonesia. Biodiversitas 19: 2374-2380. Daluga or the giant swamp taro (Cyrtosperma merkusii (Hassk.) Schott, a member of Araceae, is one of the minor tuber crops in Indonesia. It has high nutritional value for alternative food. Sequences-Related Amplified Polymorphism (SRAP) primers combinations were used for the first time to assess the genetic diversity among 36 of daluga accessions from several locations in Siau, Sangihe and Talaud islands, North Sulawesi, Indonesia. All of the samples were successfully extracted from silica-gel dried leaves using CTAB methods with minor modifications. Using six SRAP primer combinations, a total of 80 DNA fragments were yielded, varied from 75-1500 bp. The scoring of the fragments resulted in 68 (85.03%) polymorphic bands. Amongst four populations studied, Siau Island population has the highest level of genetic variation with mean values of Na = 1.9375±0.2436, Ne = 1.6409 ± 0.3255, PPL = 93.75%, H = 0.3614 ± 0.1516 and I = 0.5299 ± 0.1978. Meanwhile, Salibabu, Talaud Island population has the lowest level of genetic variation with mean values of Na = 1.5125 ± 0.5030, Ne = 1.3075 ± 0.3723 , PPL = 51.25%, H = 0.1800 ± 0.1989 and I = 0.2700 ± 0.2855. The high of polymorphic bands were generated by SRAP markers suitable for further analysis method in applied and basic of the genetic study on Cyrtosperma species and also related genera. This new genetic information can be used for baseline data for further research especially to improving the variation of daluga and for the conservation of daluga in the future.

Copyrights © 2018






Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...