Biodiversitas Journal of Biological Diversity
Vol. 20 No. 8 (2019)

Phylogenetic of sago palm (Metroxylon sagu) and others monocotyledon based on mitochondrial nad2 gene markers

Barahima Abbas (Faculty of Agriculture, Universitas Papua. Jl. Gunung Salju, Amban, Manokwari 98314, West Papua, Indonesia)
IHWAN TJOLLI (Faculty of Agriculture, Universitas Papua. Jl. Gunung Salju, Amban, Manokwari 98314, West Papua, Indonesia)
MUHAMMAD DAILAMI (Faculty of Marine and Fisheries, Universitas Brawijaya. Jl. Veteran No. 16, Malang 65145, East Java, Indonesia)
MUNARTI (Faculty of Teacher Training and Education Science, Universitas Pakuan. Jl. Pakuan, Bogor 16143, West Java, Indonesia)



Article Info

Publish Date
23 Jul 2019

Abstract

Abstract. Abbas B, Tjolli I, Dailami M, Munarti. 2019. Phylogenetic of sago palm (Metroxylon sagu) and others monocotyledon based on mitochondrial nad2 gene markers. Biodiversitas 20: 2249-2256. Sago palm forest and sago palm semi cultivated are found in the Papua islands as well as Ambon and Seram islands. The diversity center of sago palm is found in the Papua Islands. The objectives of this study are revealed sequence DNA mitochondrial associated with nad2 genes in sago palm accessions and molecular phylogenetic of sago palm and other monocotyledon plants. Plant materials used in the studies were derived from Sago Research Center (SRC) and sequencing and other monocotyledon were retrieved from the GenBank, NCBI accessions. Young fresh leaflets were derived from the experimental field of SRC and DNA extraction by following the procedure of Plant Genomic DNA Mini Kit and then PCR performed by using nad2 primer sets. Thereafter, DNA PCR product was sequenced by Macrogen Inc., Seoul, Korea. Sequences of nad2 genes in sago palm accessions from Papua, Indonesia were registered by GenBank NCBI for further used in the future as biological authenticity from the certain location. Mitochondrial DNA sequences associated with nad2 genes in the genome of sago palm were shown no differences among sago palm accessions. Molecular phylogenetic of sago palm and others monocotyledon based on nad2 gene markers showed the sago palm and others monocotyledon incorporated into two major clades and five subclades. Sago palm, coconut, and date palm were described as close related and being in the same subclades.

Copyrights © 2019






Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...