Biodiversitas Journal of Biological Diversity
Vol. 22 No. 2 (2021)

Antimicrobial susceptibility and molecular species identification of clinical carbapenem-resistant bacteria

MAULIN INGGRAINI (Department of Medical Laboratory and Technology, STIKes Mitra Keluarga. Jl. Pengasinan, Margahayu, Bekasi 17113, West Java, Indonesia)
SITI NURFAJRIAH (Department of Medical Laboratory and Technology, STIKes Mitra Keluarga. Jl. Pengasinan, Margahayu, Bekasi 17113, West Java, Indonesia)
JEPRI AGUNG PRIYANTO (Division of Microbiology, Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl Agatis, Kampus IPB Darmaga, Bogor 16680, West Java, Indonesia)
Noor Andryan Ilsan (Department of Medical Laboratory and Technology, STIKes Mitra Keluarga. Jl. Pengasinan, Margahayu, Bekasi 17113, West Java, Indonesia)



Article Info

Publish Date
13 Jan 2021

Abstract

Abstract. Inggraini M, Nurfajriah S, Priyanto JA, Ilsan NA. 2021. Antimicrobial susceptibility and molecular species identification of clinical carbapenem-resistant bacteria. Biodiversitas 22: 555-562. Antibiotic is the first option treatment for infectious diseases both in human and animal. However, the excessive usage and misuse of antibiotics have driven antibacterial resistances worldwide and the increasing case of antibiotic resistance leads to limited options for treatment. This study aimed to observe antimicrobial susceptibility and molecular identification of carbapenem-resistant human clinical bacteria. A total of nine isolates in this study were collected in 2020 from a teaching hospital in Indonesia. All isolates were originated from various human clinical specimens, including urine, blood, pus, and sputum. Identification using 16s rRNA-based showed that these isolates were closely related to Klebsiella pneumoniae (1/9), A. baumannii (5/9), Escherichia coli (2/9), and Lysinibacillus fusiformis (1/9). According to minimum inhibitory concentration using Vitek Automated Machine, four isolates of multi-drug resistant (MDR) bacteria were found. In contrast, five of them were categorized as extensively-drug resistant (XDR). Interestingly, all of the XDR isolates belonged to A. baumannii. These isolates were resistant to at least seven different antimicrobial classes. A comparison of partial 16s rRNA showed two E. coli had similar variance. While in A. baumannii isolates, we found one of five isolates had a different variance sequence, which suggests different clonality among this species. This study gives an insight into the prevalence of carbapenem-resistant bacteria with XDR criteria in Indonesia.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...