Biodiversitas Journal of Biological Diversity
Vol. 22 No. 6 (2021)

Diversity of Ralstonia pseudosolanacearum, the causal agent of bacterial wilt on Eucalyptus pellita in Indonesia

Bayo Alhusaeri Siregar (Department of Plant Protection, Faculty of Agriculture, Institut Pertanian Bogor. Jl. Kamper, Kampus IPB Darmaga, Dramaga, Bogor 16680, West Java, Indonesia)
Giyanto Giyanto (Department of Plant Protection, Faculty of Agriculture, Institut Pertanian Bogor. Jl. Kamper, Kampus IPB Darmaga, Dramaga, Bogor 16680, West Java, Indonesia)
Sri Hendrastuti Hidayat (Department of Plant Protection, Faculty of Agriculture, Institut Pertanian Bogor. Jl. Kamper, Kampus IPB Darmaga, Dramaga, Bogor 16680, West Java, Indonesia)
Iskandar Zulkarnain Siregar (Department of Silviculture, Faculty of Agriculture, Institut Pertanian Bogor. Jl. Kamper, Kampus IPB Darmaga, Dramaga, Bogor 16680, West Java, Indonesia)
Budi Tjahjono (R&D Division, PT. Arara Abadi, Sinarmas Forestry. Jl Minas-Perawang Km. 26, Perawang 28772, Riau, Indonesia)



Article Info

Publish Date
05 Jun 2021

Abstract

Abstract. Siregar BA, Giyanto, Hidayat SH, Siregar IZ, Tjahjono B. 2021. Diversity of Ralstonia pseudosolanacearum, the causal agent of bacterial wilt on Eucalyptus pellita in Indonesia. Biodiversitas 22: 2538-2545. The Ralstonia species complex was initially classified into five races and five biovars but the classification could not accommodate the isolates' phylogenetic history or geographic origins. A phylotype and sequevar system is based on the geographic distribution and characteristics of endoglucanase (egl) and hypersensitive response and pathogenicity (hrp) gene sequences. This study aims to describe pathogen diversity of the causal agent of bacterial wilt on Eucalyptus pellita F. Muell. Pathogens were isolated from wilting seedlings and trees in several Eucalyptus plantations. The phenotypic diversity analysis included biovar, exopolysaccharide quantification and virulence tests, while genotypic diversity included phylotypes and sequevar determination based on egl gene sequences. A total of 35 strains were isolated from the field and nurseries of Eucalyptus in various locations. All isolates were confirmed as Ralstonia species complex based on morphological characteristics and molecular studies using species-specific primers. These isolates were dominantly classified as biovar 3 and 4 and had a high variation on virulence and EPS production. Based on the egl sequence's alignment, 29 strains of Phylotype I are grouped into four sequevar references (sequevars 14, 17, 18, 30) and new a sequevar 58. This study shows that strains of R. pseudosolanacearum causing bacterial wilt on E. pellita in Indonesia have high phenotypic and genotypic diversities.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...