Biodiversitas Journal of Biological Diversity
Vol. 23 No. 8 (2022)

Identification and characterization of calcite producing bacteria isolated from soils in West Java, Indonesia

MARCELIA SUGATA (Department of Biology, Faculty of Science and Technology, Universitas Pelita Harapan. Jl. MH. Thamrin Boulevard 1100, Tangerang 15811, Banten, Indonesia)
NERISSA ARVIANA (Department of Biology, Faculty of Science and Technology, Universitas Pelita Harapan. Jl. MH. Thamrin Boulevard 1100, Tangerang 15811, Banten, Indonesia)
LASTRI TAMPUBOLON (Department of Biology, Faculty of Science and Technology, Universitas Pelita Harapan. Jl. MH. Thamrin Boulevard 1100, Tangerang 15811, Banten, Indonesia)
JACK WIDJAJAKUSUMA (Department of Civil Engineering, Faculty of Science and Technology, Universitas Pelita Harapan. Jl. MH. Thamrin Boulevard 1100, Tangerang 15811, Banten, Indonesia)
HANS VICTOR (Department of Biology, Faculty of Science and Technology, Universitas Pelita Harapan. Jl. MH. Thamrin Boulevard 1100, Tangerang 15811, Banten, Indonesia)
TAN TJIE JAN (Department of Biology, Faculty of Science and Technology, Universitas Pelita Harapan. Jl. MH. Thamrin Boulevard 1100, Tangerang 15811, Banten, Indonesia)



Article Info

Publish Date
16 Aug 2022

Abstract

Abstract. Sugata M, Arviana N, Tampubolon L, Widjajakusuma J, Victor H, Jan TT. 2022. Identification and characterization of calcite producing bacteria isolated from soils in West Java, Indonesia. Biodiversitas 23: 3921-3927. Bio-mediated soil improvement as an interdisciplinary application of geotechnical engineering and microbiology has gained attention due to its environmentally friendly and sustainable properties. This study aimed to isolate indigenous bacteria from soils in Indonesia and evaluate their ability to precipitate calcium carbonate. Fifty-seven colonies were isolated from three soil samples of different locations in Indonesia (Cikarang, Medang, and Karawang). Screening of calcite-producing bacteria was carried out using B4 agar medium incubated for 7-14 days. Only twenty isolates showed the potential ability to form precipitate on B4 agar medium. All the twenty isolates were characterized morphologically and biochemically. For molecular analysis, two isolates, LK3 and NC7, were chosen based on the morphological similarities with Bacillus: Gram-positive, spore-forming rod bacteria. According to 16S rRNA gene sequence analysis using the Basic Local Alignment Search Tool (BLAST), LK3 was identified as Bacillus subtilis LK3 and NC7 was identified as Bacillus cereus NC7. At a temperature of 30 °C, B. cereus NC7 showed the highest growth and produced the most calcite precipitates. In addition, pH 9 was the optimum condition for crystal formation by these bacteria. In conclusion, B. cereus NC7 as indigenous bacteria might be feasible to be used for local soil improvement.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...