Biodiversitas Journal of Biological Diversity
Vol. 23 No. 9 (2022)

DNA barcoding of Macrocephalon maleo originating from Sulawesi, Indonesia

Abdul Samad (Program of Animal Bioscience, Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Raya Dramaga, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia)
DEDY D. SOLIHIN (Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Raya Dramaga, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia)
CECE SUMANTRI (Department of Animal Production Science and Technology, Faculty of Animal Science, Institut Pertanian Bogor. Jl. Raya Dramaga, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia)
BAMBANG PURWANTARA (Department of Veterinary Clinic Reproduction and Pathology, Faculty of Veterinary Medicine, Institut Pertanian Bogor. Jl. Raya Dramaga, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia)



Article Info

Publish Date
02 Sep 2022

Abstract

Abstract. Samad A, Solihin DD, Sumantri C, Purwantara B. 2022. DNA barcoding of Macrocephalon maleo originating from Sulawesi, Indonesia. Biodiversitas 23: 4400-4408. Conservation of Maleo Senkawor (Macrocephalon maleo Sal. Muller, 1846) continues to be carried out to sustain this bird species. The genetic information from this study can be used to support future conservation activities. This study aimed to provide information on the genetic characteristics of the endangered Maleo Senkawor based on the partial sequence of the Cytochrome Oxidase 1 (COI) gene in mitochondrial DNA. Samples were collected from Central Sulawesi, Southeast Sulawesi, and North Sulawesi. Total DNA isolation was performed using the Dneasy® Blood and Tissue kit through a modified Qiagen protocol. PCR amplification used a forward primer MMCOI_F (5'-ccgatgattattctcaacca-3') and a reverse primer MMCOI_R (5'- gtagccgaatggttcttttt-3'). Analysis was performed on the partial sequences of the M. maleo COI mtDNA gene and its amino acid sequences. The genetic distance between the M. maleo population from North Sulawesi, Southeast and Central Sulawesi is 0.001 (0.1%). Macrocephalon maleo population of Southeast and Central Sulawesi have 0% genetic distance. Analysis of the COI M. maleo gene from 3 population locations showed that they came from the same species. Based on the genetic distance of the Kimura model with 2 parameters in the 3 populations, the M. maleo formed the same group (ingroup species) but had a different haplotype. These differences can be used as characterizing markers in each population. Furthermore, the conservation of M. maleo from these 3 populations was better treated as a separate group based on the mitochondrial DNA COI gene to avoid the negative impact of interpopulation breeding.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...