Biodiversitas Journal of Biological Diversity
Vol. 23 No. 10 (2022)

Diversity of bacterial phenol hydroxylase-encoding genes from gasoline-contaminated silt soil

SURAJ RAJAN VASANDANI (Program of Biotechnology, Faculty of Biotechnology, Universitas Katolik Indonesia Atma Jaya. BSD Campus, Jl. Raya Cisauk-Lapan No.10, Tangerang 15345, Banten, Indonesia)
WATUMESA AGUSTINA TAN (Program of Biotechnology, Faculty of Biotechnology, Universitas Katolik Indonesia Atma Jaya. BSD Campus, Jl. Raya Cisauk-Lapan No.10, Tangerang 15345, Banten, Indonesia)



Article Info

Publish Date
28 Oct 2022

Abstract

Abstract. Vasandani SR, Tan WA. 2022. Diversity of bacterial phenol hydroxylase-encoding genes from gasoline-contaminated silt soil. Biodiversitas 23: 5502-5506. Phenol is an aromatic compound often used as a raw material or intermediate in various industries. Improper handling and disposal may lead to the accumulation of this hazardous compound. Bioremediation is the most viable method to remove phenol from contaminated environment. In this study, the diversity of genes that encode for phenol hydroxylase, a key enzyme in phenol degradation, was assessed in gasoline-contaminated soil from a commercial gas station in Central Jakarta, Indonesia. Partial phenol hydroxylase-encoding gene library was constructed using a pair of universal primer in the pGEMĀ®-Teasy vector. A total of 30 recombinant clones were obtained and sequenced to analyze the genetic diversity of this gene. Obtained clones were 86-99% identical to phenol hydroxylase-related proteins. Phylogenetic tree analysis on amino acid sequences derived from our library revealed that 56.7% of the cloned fragments were closely related to Proteobacteriodota and 20.0% of them were clustered with Actinomycetota. The rest 23.3% of the clones formed a cluster separate from any of the reference sequences, possibly indicating the presence of novel phenol hydroxylase genes.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...