Biodiversitas Journal of Biological Diversity
Vol. 24 No. 3 (2023)

Morpho-physiological and molecular characteristics of bacteria causing stalk rot disease on corn in Gorontalo, Indonesia

SURIANI SURIANI (Doctorol Program, Graduate School, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)
BAHARUDDIN PATANDJENGI (Department of Pest and Plant Diseases, Faculty of Agriculture, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)
AMRAN MUIS (Research Center for Food Crops, National Research and Innovation Agency. Jl. Raya Jakarta-Bogor Km. 46, Cibinong, Bogor 16911, West Java, Indonesia)
MUHAMMAD JUNAID (Department of Pest and Plant Diseases, Faculty of Agriculture, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)
HISHAR MIRSAM (Research Center for Food Crops, National Research and Innovation Agency. Jl. Raya Jakarta-Bogor Km. 46, Cibinong, Bogor 16911, West Java, Indonesia)
MUHAMMAD AZRAI (Department of Agronomy, Faculty of Agriculture, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)



Article Info

Publish Date
02 Apr 2023

Abstract

Abstract. Suriani, Patandjengi B, Muis A, Junaid M, Mirsam H, Azrai M. 2023. Morpho-physiological and molecular characteristics of bacteria causing stalk rot disease on corn in Gorontalo, Indonesia. Biodiversitas 24: 1749-1758. Stalk rot disease was observed in corn in Gorontalo with typical symptoms, such as soft rot on the stalk, leaf wilting, and plant death. This study aimed to characterize the bacteria causing stalk rot disease in corn. Samples of infected plants were collected and identified morphologically, physiologically, and molecularly. The results showed that nine bacterial isolates were isolated from infected plants. All nine isolates showed positive hypersensitive responses on tobacco leaves. In comparison, only two bacterial isolates (BGO1 and BGO4) were positive on pathogenicity tests on corn. However, the BGO4 isolate caused the highest disease incidence with a faster incubation period. The BGO4 isolate was gram-negative with white-gray colored colonies. Physiological characterization of BGO4 also showed: positive catalase and indole, oxidase negative, fermentative oxidation, caused soft rot on potato, non-fluorescent, and sensitive to erythromycin. In addition, it can grow at 37-40°C and 5% NaCl, producing protease and lecithinase enzymes. The BGO4 also isolates infected rice, corn, sorghum, foxtail millet, celery, and Aloe vera. Morpho-physiology characteristics and diagnostic amplification of DNA by PCR using the Dickeya-specific primers (ADE1/ADE2) showed that the isolate belongs to the genus Dickeya. Further molecular characterization by analysis of the 16S rDNA using universal primer 27F/1497R successfully amplified the DNA band of BGO4 isolate measuring ±1300 bp. Phylogenetic analysis showed that it was in the same group as Dickeya zeae strain MS32 from Taiwan, strain DZ15SB01 (Thailand), and strain HNJF02 (China), with the coefficient of genetic distance ranging from 0.001 to 0.002. This study is the first report of D. zeae infecting corn in Gorontalo.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...