Biodiversitas Journal of Biological Diversity
Vol. 24 No. 9 (2023)

Genetic characterization of superior durian (Durio zibethinus L.) accessions in Batang District, Central Java, Indonesia based on ISSR markers

MUHAMMAD ISBAT AMRULLAH (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Jl. Raya Sekaran, Semarang 50221, Central Java, Indonesia)
ENNI SUWARSI RAHAYU (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Jl. Raya Sekaran, Semarang 50221, Central Java, Indonesia)
ELING PUWANTOYO (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Jl. Raya Sekaran, Semarang 50221, Central Java, Indonesia)
RIA IKA MAHARANI (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Jl. Raya Sekaran, Semarang 50221, Central Java, Indonesia)
SOLICHIN SOLICHIN (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Jl. Raya Sekaran, Semarang 50221, Central Java, Indonesia)
SRIYADI SRIYADI (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Jl. Raya Sekaran, Semarang 50221, Central Java, Indonesia)
TRI YANUAR HADIPRASETYA (Griya Mukti Indah A.34, Kecepak, Batang District, Central Java, Indonesia)
AMIN RETNONINGSIH (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Jl. Raya Sekaran, Semarang 50221, Central Java, Indonesia)



Article Info

Publish Date
02 Oct 2023

Abstract

Abstract. Amrullah MI, Rahayu ES, Puwantoyo E, Maharani RI, Solichin, Sriyadi, Hadiprasetya TY, Retnoningsih A. 2023. Genetic characterization of superior durian (Durio zibethinus L.) accessions in Batang District, Central Java, Indonesia based on ISSR markers. Biodiversitas 24: 4811-4819. Durian (Durio zibethinus L.) has the highest level of genetic diversity in the genus of Durio. The genetic diversity of D. zibethinus in Batang District, Central Java, Indonesia needs to be explored to obtain data on superior durian accessions that are adaptive in the area. This study aimed to analyze the genetic diversity of 40 superior durian accessions from 13 locations in Batang District using 10 Inter Simple Sequence Repeat (ISSR) primers. Genomic DNA was isolated from leaves using a modified CTAB method. PCR products were electrophoresed on 2% agarose and yielded 161 ISSR alleles with a percentage of 100% polymorphic alleles. The level of genetic diversity based on Nei's gene diversity and Shannon's Information index are 0.277 and 0.434, respectively. The durian accessions studied have a similarity coefficient of 0.22-0.86 and are divided into two main clusters. Siwatu 1 and Siwatu 2 accessions have the highest genetic similarity coefficient (0.86), while Butternuts and Watu Tembogo 1 accessions show the lowest genetic similarity coefficient (0.05). Specific alleles were found in 11 durian accessions. The molecular characterization results show the high genetic diversity of superior durian accessions in Batang District and add to the list of local superior durian accessions in Indonesia.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...