Biodiversitas Journal of Biological Diversity
Vol. 24 No. 7 (2023)

Genetic variation and population structure of brachiopods, Lingula anatina Lamarck, 1801 in the Northern Aceh shore, Indonesia

CHITRA OCTAVINA (Department of Marine Science, Faculty of Marine Science and Fisheries, Universitas Syiah Kuala. Jl. Teuku Nyak Arief No. 44, Banda Aceh 23111, Aceh, Indonesia)
MUTIA RAMADHANIATY (Department of Marine Science, Faculty of Marine Science and Fisheries, Universitas Syiah Kuala. Jl. Teuku Nyak Arief No. 44, Banda Aceh 23111, Aceh, Indonesia)
RAHMA EFFENDIE DAULAY (Department of Marine Science, Faculty of Marine Science and Fisheries, Universitas Syiah Kuala. Jl. Teuku Nyak Arief No. 44, Banda Aceh 23111, Aceh, Indonesia)
IRMA DEWIYANTI (Department of Marine Science, Faculty of Marine Science and Fisheries, Universitas Syiah Kuala. Jl. Teuku Nyak Arief No. 44, Banda Aceh 23111, Aceh, Indonesia)
MARIA ULFAH (Department of Marine Science, Faculty of Marine Science and Fisheries, Universitas Syiah Kuala. Jl. Teuku Nyak Arief No. 44, Banda Aceh 23111, Aceh, Indonesia)



Article Info

Publish Date
28 Jul 2023

Abstract

Abstract. Octavina C, Ramadhaniaty M, Daulay RE, Dewiyanti I, Ulfah M. 2023. Genetic variation and population structure of brachiopods, Lingula anatina Lamarck, 1801 in the Northern Aceh shore. Biodiversitas 24: 3951-3959. Lingula anatina is one of the brachiopods recognized as one of the most primitive groups with a fossil record from the early Cambrian period. Although L. anatina has been targeted as an object of biological studies, the information about the genetic variation within species is still limited. The purpose of this research is to identify the genetic variation and population structure of the species L. anatina found in the Aceh northern shore based on the mtDNA Cytochrome Oxidase I (COI) gene sequence. In this study, L. anatina specimens collected from five populations on Aceh's northern shore, namely Krueng Raya, Syiah Kuala, Ulee Lheue, and Ujong Pancu, with complete mitochondrial genome sequences were analyzed and compared with genebank sequences. The total nucleotide base of L. anatina is 657 bp, with 18 haplotypes. Based on the results of a comparison of the distribution of L. anatina in Asia shows that the Japanese population has the highest population structure value compared to the other five populations. The Fst value obtained from this study is 0.7, so it is classified as high and structured. Phylogenetic analysis showed that the correlation between geographic location and geographic distance affects the genetic distance between populations.

Copyrights © 2023






Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...