Biodiversitas Journal of Biological Diversity
Vol. 24 No. 9 (2023)

Microbial diversity in pesticidal and non-pesticidal paddy soil microbiomes

R. SUSANTI (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Kampus Sekaran, Gunung Pati, Semarang 50229, Central Java, Indonesia)
NAINA RIZKI KENARNI (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Kampus Sekaran, Gunung Pati, Semarang 50229, Central Java, Indonesia)
ADI FRANATA JAYA (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Kampus Sekaran, Gunung Pati, Semarang 50229, Central Java, Indonesia)
FARAH FITROTUN NISA’ (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Kampus Sekaran, Gunung Pati, Semarang 50229, Central Java, Indonesia)
RISKA LAILA MUKAROMAH (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Kampus Sekaran, Gunung Pati, Semarang 50229, Central Java, Indonesia)
TALITHA WIDIATNINGRUM (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Kampus Sekaran, Gunung Pati, Semarang 50229, Central Java, Indonesia)
NANA KARIADA TRI MARTUTI (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Kampus Sekaran, Gunung Pati, Semarang 50229, Central Java, Indonesia)
MARGARETA RAHAYUNINGSIH (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Negeri Semarang. Kampus Sekaran, Gunung Pati, Semarang 50229, Central Java, Indonesia)



Article Info

Publish Date
01 Oct 2023

Abstract

Abstract. Susanti R, Kenarni NR, Jaya AF, Nisa’ FF, Mukaromah RL, Widiatningrum T, Martuti NKT, Rahayuningsih M. 2023. Microbial diversity in pesticidal and non-pesticidal paddy soil microbiomes. Biodiversitas 24: 4723-4730. The use of pesticides can affect the physical and chemical properties of paddy soil. Soil physical and chemical properties can indicate soil quality because they affect soil microbial activity. This study used an exploratory observational method to analyze the diversity and abundance of microbes in the soil microbiome of pesticide paddy fields (PPF) and non-pesticide paddy fields (PF). The PPF samples were taken from Purwosari Village, Mijen Subdistrict, Semarang City, while the PF samples were taken from Tambangan Village, Mijen Subdistrict, Semarang City. Soil samples were taken for chemical and metagenomic analysis based on 16S rRNA gene marker region V3-V4. The results showed that microbial PPF diversity was higher than PF's based on the Shannon and Simpson index. The PPF microbiome is dominated by 3 bacterial phyla, namely Proteobacteria (26.61%), Actinobacteriota (15.13%) and Acidobacteriota (11.44%). Meanwhile, the PF microbiome was dominated by Proteobacteria (28.73%), Acidobacteriota (12.80%), and Chloroflexi (11.41%). The Archaea phylum that dominates PPF are Halobacterota (62.78%), Euryarchaeota (20.82%), and Crenarchaeota (10.89%), while in PF it is dominated by Halobacterota (80.43%), Crenarchaeota (11.03%) and Euryarchaeota (5.04%). The phylum that plays an important role in the biodegradation of organochlorine pesticides is Actinobacteria, which dominates in PPF; low abundance of Nitrospirota in PPF as a bioindicator of organochlorine pesticide contamination.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...