Biodiversitas Journal of Biological Diversity
Vol. 24 No. 11 (2023)

Identification and molecular detection of Arbuscular Mycorrhizal Fungi colonized naturally in citrus roots in nurseries

YENNY SARIASIH (PhD Student of Agricultural Science, Universitas Gadjah Mada. Jl. Flora No. 1, Bulaksumur, Sleman 55281, Yogyakarta, Indonesia)
SITI SUBANDIYAH (Faculty of Agriculture, Universitas Gadjah Mada. Jl. Flora No. 1, Bulaksumur, Sleman 55281, Yogyakarta, Indonesia)
SRI WIDYANINGSIH (Research Center for Horticultural and Estate Crops, National Research and Innovation Agency (BRIN). Jl. Raya Bogor Km46, Bogor 16911, West Java, Indonesia)
TAHIR KHURSHID (NSW Department of Primary Industries. 21888 Kamilaroi Highway, Narrabri NSW 2390, Australia)
JIANHUA MO (NSW Department of Primary Industries. 21888 Kamilaroi Highway, Narrabri NSW 2390, Australia)



Article Info

Publish Date
07 Dec 2023

Abstract

Abstract. Sariasih Y, Subandiyah S, Widyaningsih S, Khurshid T, Mo J. 2023. Identification and molecular detection of Arbuscular Mycorrhizal Fungi colonized naturally in citrus roots in nurseries. Biodiversitas 24: 6283-6290. Citrus plants heavily depend on arbuscular mycorrhizal (AMF), a diverse collection of fungi. The objective of this study was to investigate the root colonization, spore density, spore morphology, and molecular identification of AMF colonizing four citrus root species: Japansche Citroen (Citrus limonia Osbeck.), Cleopatra mandarin (Citrus reshni), Salam (Fortunella japonica cv. "Salam"), and Rough Lemon (Citrus jambhiri). AMF was identified by observing spore morphology and molecular PCR methods using the group-specific primers of Glomeromycota, AML1/AML2. Based on the morphological observation, C. limonia was found with the highest root colonization (50%), followed by F. japonica cv Salam (44%), C. reshni (38%), and C. jambhiri (36%). The highest number of AMF spores was found on C. jambhiri rhizosphere soil, which had 1,379 spores/100 g of soil with the lowest percentage of root colonization. Three mycorrhizal genera were identified, with Funneliformis (syn. Glomus) being the most dominant genus, followed by Gigaspora and Acaulospora. The sequence of PCR products confirmed the highest similarity range from 83.7-99.0% to that of Funneliformis, followed by Acaulospora at a similarity range from 83.3-99.0% and found on all of the citrus species. The similarity sequence of the PCR products to that of Gigaspora ranged between 83.3-95.0%, which was only found on C. reshni and C. jambhiri.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...