Biodiversitas Journal of Biological Diversity
Vol. 24 No. 12 (2023)

Comparison of genetic diversity of LEP gene between Indonesia domestic goats: Etawa Cross and Senduro Goats

MUHAMMAD FAJAR AMRULLAH (Graduate Program of Reproductive Biology, Faculty of Veterinary Medicine, Universitas Airlangga. Jl. Dr. Ir. H. Soekarno, Kampus C Mulyorejo, Surabaya 60115, East Java, Indonesia)
BUDI UTOMO (Division of Veterinary Reproduction, Faculty of Veterinary Medicine, Universitas Airlangga. Jl. Dr. Ir. H. Soekarno, Kampus C Mulyorejo, Surabaya 60115, East Java, Indonesia)
SUZANITA UTAMA (Division of Veterinary Reproduction, Faculty of Veterinary Medicine, Universitas Airlangga. Jl. Dr. Ir. H. Soekarno, Kampus C Mulyorejo, Surabaya 60115, East Java, Indonesia)
TITA DAMAYANTI LESTARI (Graduate Program of Reproductive Biology, Faculty of Veterinary Medicine, Universitas Airlangga. Jl. Dr. Ir. H. Soekarno, Kampus C Mulyorejo, Surabaya 60115, East Java, Indonesia)
TRI WAHYU SUPRAYOGI (Division of Veterinary Reproduction, Faculty of Veterinary Medicine, Universitas Airlangga. Jl. Dr. Ir. H. Soekarno, Kampus C Mulyorejo, Surabaya 60115, East Java, Indonesia)
TJUK IMAM RESTIADI (Division of Veterinary Reproduction, Faculty of Veterinary Medicine, Universitas Airlangga. Jl. Dr. Ir. H. Soekarno, Kampus C Mulyorejo, Surabaya 60115, East Java, Indonesia)
RISTAQUL HUSNA BELGANIA (Graduate Program of Reproductive Biology, Faculty of Veterinary Medicine, Universitas Airlangga. Jl. Dr. Ir. H. Soekarno, Kampus C Mulyorejo, Surabaya 60115, East Java, Indonesia)
SUHENDRA PAKPAHAN (Research Center for Applied Zoology, Research Organization for Life Sciences, National Research and Innovation Agency (BRIN). Jl. Jakarta-Bogor Km. 46, Bogor 16911, West Java, Indonesia)
ASWIN RAFIF KHAIRULLAH (Division of Animal Husbandry, Faculty of Veterinary Medicine, Universitas Airlangga. Jl. Dr. Ir. H. Soekarno, Kampus C Mulyorejo, Surabaya 60115, East Java, Indonesia)
SHENDY CANADYA KURNIAWAN (Graduate Program of Animal Sciences, Department of Animal Sciences, Specialisation in Molecule, Cell and Organ Functioning, Wageningen University and Research. Wageningen 6708 PB, Netherlands)
OTTO SAHAT MARTUA SILAEN (Doctoral Program in Biomedical Science, Faculty of Medicine, Universitas Indonesia. Jl. Salemba Raya No. 6 Senen, Central Jakarta 10430, Jakarta, Indonesia)
ABDULLAH HASIB (School of Agriculture and Food Sustainability, The University of Queensland. Gatton, QLD, 4343, Queensland)



Article Info

Publish Date
28 Dec 2023

Abstract

Abstract. Amrullah MF, Utomo B, Utama S, Lestari TD, Suprayogi TW, Restiadi TI, Belgania RH, Pakpahan S, Khairullah AR, Kurniawan SC, Silaen OSM, Hasib A. 2023. Comparison of genetic diversity of LEP gene between Indonesia domestic goats: Etawa Cross and Senduro Goats. Biodiversitas 24: 6567-6573. The leptin (LEP) gene is a gene that functions to produce the hormone leptin secreted by fat tissue that can increase livestock productivity. This study aimed to identify the profile of the LEP gene between Etawah Cross goats and Senduro goats. Gene profiling includes single nucleotide polymorphisms (SNPs) and phylogeny tree reconstruction. Furthermore, 10 whole blood samples from 5 Etawah Cross goats and 5 Senduro goats were collected from goat farms in Lumajang District, Lumajang Regency, Indonesia. The Research procedure involved collecting blood samples, extracting DNA, amplification using the polymerase chain reaction (PCR) method using specific primers, and nucleotide sequencing method. The edited DNA sequences were aligned with some DNA sequences (n=32) of the Capra hircus group published in Genbank. The results of this study obtained the alignment of the LEP gene sequences of Etawah Cross goats and Senduro goats, including T723A, G729A, G758A, A763T, G774C, T1100C, and G1454A. Based on the LEP gene phylogeny tree, Etawah Cross goats and Senduro goats belong to the same clade and have a close kinship with the Bligon goats. The profile of the LEP gene between Etawah Cross goats and Senduro goats varies so that further studies can be carried out to look for the relationship between SNPs and the productivity traits of the LEP gene.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...