Biodiversitas Journal of Biological Diversity
Vol. 25 No. 11 (2024)

Metagenomic analysis of the bacterial community and gamma-aminobutyric acid (GABA) synthesis by lactic acid bacteria from seredele, a Balinese fermented soybean product

PURWANINGTYAS KUSUMANINGSIH (Nutrition Department, Faculty of Health and Science, Universitas Dhyana Pura. Jl. Raya Padang Luwih, Badung 83061, Bali, Indonesia)
YOGA DWI JATMIKO (Department of Biology, Faculty of Mathematics and Natural Science, Universitas Brawijaya. Jl. Veteran No. 10-11, Malang 65145, East Java, Indonesia)
I GUSTI AYU KUSUMAWATI (Nutrition Department, Faculty of Health and Science, Universitas Dhyana Pura. Jl. Raya Padang Luwih, Badung 83061, Bali, Indonesia)
NI WAYAN NURSINI (Nutrition Department, Faculty of Health and Science, Universitas Dhyana Pura. Jl. Raya Padang Luwih, Badung 83061, Bali, Indonesia)
IDA BAGUS AGUNG YOGESWARA (Nutrition Department, Faculty of Health and Science, Universitas Dhyana Pura. Jl. Raya Padang Luwih, Badung 83061, Bali, Indonesia)



Article Info

Publish Date
30 Nov 2024

Abstract

Abstract. Kusumaningsih P, Jatmiko YD, Kusumawati IGA, Nursini NW, Yogeswara IBA. 2024. Metagenomic analysis of the bacterial community and gamma-aminobutyric acid (GABA) synthesis by lactic acid bacteria from seredele, a Balinese fermented soybean product. Biodiversitas 25: 4190-4198. Seredele is a fermented Balinese soybean product that undergoes spontaneous fermentation for two days at room temperature. This fermented food, commonly consumed as a condiment, has a distinctive smell similar to Japanese natto. The bacterial dynamics during fermentation using a metagenomic approach have not been reported. This study aimed to reveal bacterial dynamics during seredele fermentation and to obtain gamma-aminobutyric acid (GABA)-producing lactic acid bacteria from seredele. The bacterial dynamics of seredele were investigated using 16S rRNA sequencing. Lactic acid bacteria (LAB) were also isolated and screened for their ability to produce GABA. The metagenomics analysis showed that Weissella, Streptococcus, and Enterococcus are the most prevalent bacterial genera during fermentation. The relative abundance of bacteria at the species level indicates that W. confusa, W. paramesenteroides, E. faecium, S. lutetiensis, and E. durans are the most abundant bacteria at all stages of fermentation. Consistent with the metagenomic analysis, two strains, Limosilactobacillus fermentum A7304 and Enterococcus lactis A7303, produced 60 mg/L and 65 mg/L of GABA, respectively, in de Man Rogosa (MRS) medium enriched with 1% monosodium glutamate (MSG). This work opens opportunities to understand the bacterial dynamics in seredele and its potential as a source of GABA-producing bacteria.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...