Biodiversitas Journal of Biological Diversity
Vol. 26 No. 3 (2025)

Screening of actinobacteria isolated from rice and their potential to inhibit virulence of Xanthomonas oryzae pv. oryzae

ULVANA TRI NURWULAN (Department of Plant Protection, Faculty of Agriculture, Universitas Gadjah Mada. Jl. Flora, Bulaksumur, Sleman 55281, Yogyakarta, Indonesia)
TRI JOKO (Department of Plant Protection, Faculty of Agriculture, Universitas Gadjah Mada. Jl. Flora, Bulaksumur, Sleman 55281, Yogyakarta, Indonesia)
TRIWIDODO ARWIYANTO (Department of Plant Protection, Faculty of Agriculture, Universitas Gadjah Mada. Jl. Flora, Bulaksumur, Sleman 55281, Yogyakarta, Indonesia)



Article Info

Publish Date
25 Mar 2025

Abstract

Abstract. Nurwulan UT, Joko T, Arwiyanto T. 2025. Screening of actinobacteria isolated from rice and their potential to inhibit virulence of Xanthomonas oryzae pv. oryzae. Biodiversitas 26: 1424-1432. Xanthomonas oryzae pv. oryzae (Xoo), the pathogen causing bacterial leaf blight, is a major obstacle to improving rice productivity. The virulence factors of Xoo, such as motility, biofilm formation, and Extracellular Polysaccharides (EPS), are significant contributors to its pathogenicity. Actinobacteria, known for their beneficial properties, have promising applications in biological control. This study aimed to isolate actinobacteria and evaluate their potential to suppress Xoo virulence. Actinobacteria isolates were obtained from paddy fields in Yogyakarta, which have been proven to effectively inhibit the swimming, swarming, and twitching motility of Xoo. Isolates KpNg1 and Bs3 showed the most significant suppression, reducing motility to an average diameter of 0.2 cm. All actinobacteria isolates demonstrated the ability to inhibit biofilm formation, as indicated by reduced absorbance values in the crystal violet binding assay, with biofilm inhibitory rates ranging from 16% to 78%. Similarly, the EPS inhibition assay showed that all isolates significantly decreased EPS production, with inhibitory rates ranging from 4% to 49%. The inhibition of Xoo virulence factors is associated with quorum quenching mechanisms, particularly in relation to pili and flagella function. Isolates Bs1, KpS, and Bs3 were found to be closely related to Rhodococcus sovatensis by phylogenetic analysis based on 16S rRNA gene sequences. At the same time, isolates KpNg1, SGg, and Bs2 were found to be closely related to Rhodococcus yunnanensis. These findings underscore the intriguing role of actinobacteria in suppressing Xoo virulence, paving the way for further research and potential applications in biological control.

Copyrights © 2025






Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...