Jurnal Biologi Tropis
Vol. 26 No. 4 (2026): in Progress

Metabolite Profiling and Molecular Docking of Candidate Fungal Postbiotics Derived from Rhizopus oligosporus

Angga Prasetyo (Politeknik Negeri Jember)
Rasmiyana Rasmiyana (Unknown)



Article Info

Publish Date
23 Oct 2026

Abstract

Fungal postbiotics have gained increasing attention as a source of bioactive metabolites with potential applications in food preservation. Previous studies have demonstrated that candidate fungal postbiotics produced by Rhizopus oligosporus cultivated on edamame husks (Glycine max L. Merrill) contain phenolic compounds and exhibit antioxidant activity. Building on these findings, this study aimed to characterize the metabolites present in candidate postbiotics and evaluate their antibacterial potential using molecular docking. Candidate postbiotics were produced by submerged fermentation and analyzed using gas chromatography-mass spectrometry (GC-MS). The major metabolites were docked to Staphylococcus aureus DNA gyrase subunit B (PDB ID: 4URM). GC-MS revealed a diverse metabolite profile dominated by 2,3-butanediol, followed by glycerin, dianhydromannitol, benzoic acid, and n-hexadecanoic acid. All selected metabolites exhibited negative predicted docking score, indicating thermodynamically favorable interactions with the target protein. Among them, n-hexadecanoic acid showed the strongest predicted binding affinity, followed by benzoic acid. These findings suggest that candidate fungal postbiotics derived from R. oligosporus-fermented edamame husks are promising natural bioactive ingredients for food biopreservation and active food packaging. Future molecular dynamics simulations and experimental validation are needed to confirm these computational predictions.  

Copyrights © 2026






Journal Info

Abbrev

JBT

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Immunology & microbiology

Description

Jurnal Biologi Tropis (ISSN Cetak 1411-9587 dan ISSN Online 2549-7863) diterbitkan mulai tahun 2000 dengan frekuensi 2 kali setahun oleh Program Studi Pendidikan Biologi PMIPA FKIP Universitas Mataram, berisi hasil penelitian dan ulasan Ilmiah dalam bidang Biologi ...