Jurnal Biologi Tropis
Vol. 26 No. 4 (2026): in Progress

Optimization of Loop-Mediated Isothermal Amplification (LAMP) Conditions for the Detection of Mycobacterium tuberculosis complex

Iftitahul Hayati (universitas andalas)
Andani Eka Putra (Universitas Andalas)
Linosefa Linosefa (Universitas Andalas)



Article Info

Publish Date
02 Nov 2026

Abstract

Tuberculosis (TB) remains a major global health concern, highlighting the need for accessible molecular diagnostic methods. Loop-mediated isothermal amplification (LAMP) is a DNA amplification technique with potential for TB detection, although its performance depends on appropriate reaction conditions. Objective: This study aimed to evaluate incubation temperature and time for LAMP amplification targeting the mpt64 (Rv1980c) gene. This laboratory experimental study was conducted at the Center for Diagnostic Research and Infectious Diseases Laboratory, Universitas Andalas, Padang, Indonesia. Nine temperature–time combinations were evaluated using three incubation temperatures (63°C, 64°C, and 65°C) and three incubation times (30, 40, and 60 minutes). Amplification results were assessed using SYBR Green I fluorescence and 2% agarose gel electrophoresis and analyzed descriptively. The condition of 65°C for 60 minutes was selected for further evaluation because a clearer DNA band was observed in the positive control, whereas no clear DNA band was detected in the negative control. However, green fluorescence was observed in both controls in some observations, indicating inconsistent visual differentiation using SYBR Green I. The reaction condition of 65°C for 60 minutes was selected as the most suitable condition among those evaluated based on the agarose gel electrophoresis results. Further studies are needed to assess the consistency and specificity of the amplification products.

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Journal Info

Abbrev

JBT

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Immunology & microbiology

Description

Jurnal Biologi Tropis (ISSN Cetak 1411-9587 dan ISSN Online 2549-7863) diterbitkan mulai tahun 2000 dengan frekuensi 2 kali setahun oleh Program Studi Pendidikan Biologi PMIPA FKIP Universitas Mataram, berisi hasil penelitian dan ulasan Ilmiah dalam bidang Biologi ...