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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 10 Documents
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Search results for , issue "vol. 11 no. 1 (2010)" : 10 Documents clear
Genetic variations among Indonesian native cattle breeds based on polymorphisms analysis in the growth hormone loci and mitochondrial DNA SUTARNO SUTARNO
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110101

Abstract

Sutarno (2010). Genetic variations among Indonesian native cattle breeds based on polymorphisms analysis in the growth hormone loci and mitochondrial DNA. Biodiversitas 11: 1-5. Genetic variation within breeds is important and its study has become a subject of interest in livestock species, as it has many applications in animal breeding and genetics, such as the identification of animals and parentage testing, gene mapping and identifying markers for performance traits. Two loci of bovine growth hormone genes, and two regions of mitochondrial DNA, D-loop and ND-5 were characterized using polymerase chain reaction – restriction fragment length polymorphism (CR-RFLP) involving 120 Indonesian native cattle of Bali, Madura, PO and West Sumatra breeds. The results indicated that sequence variations were detected both in the growth hormone loci and mitochondrial DNA.
Systematic studies of Australian stipoid grasses (Austrostipa) based on micro-morphological and molecular characteristics BETTY MAULIYA BUSTAM
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110103

Abstract

Bustam BM (2010) Systematic studies of Australian stipoid grasses (Austrostipa) based on micro morphological and molecular characteristics. Biodiversitas 11: 9-14. This research is one of many studies on stipoid grasses organized by the International Stipeae Working Group (ISWG). This research tested the subgeneric classification of Austrostipa proposed by Jacobs and Everett (1996) and tested how informative the micro morphological characters used. Data were collected from herbarium specimens of 36 species (33 species of Austrostipa, two species of Hesperostipa and one species of Anemanthele) at Royal Botanic Gardens, Sydney. Twenty eight micro morphological characters were used. The data were collected from both adaxial and abaxial surfaces of leaves, and from the lemma epidermis using a scanning electron microscope (SEM). ISWG provided the molecular data. Parsimony analysis and a distance method (Unweighteic Pair Group with Arithmatic Mean: UPGMA) were used to analyze micro-morphological and molecular data separately. Only UPGMA analysis was used to analyze the combined data. The results support the monophyly of Austrostipa. However, there is a little support for the subgeneric classification of Austrostipa proposed by Jacobs and Everett (1996), other than for the consistent recognition of Falcatae. The characters for comparisons between genera are too homoplasious at this level and do not contain enough information for analyses at subgeneric level, a problem apparently shared with the DNA sequences.Key words: Austrostipa, stipoid grasses, micro morphological, molecular
The genetics of glutamate oxaloacetate transaminase (GOT) in Pinus merkusii Jungh. et de Vriese ISKANDAR ZULKARNAEN SIREGAR; TEDI YUNANTO
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110102

Abstract

Siregar IZ, Yunanto T. (2010). The genetics of glutamate oxaloacetate transaminase (GOT) in Pinus merkusii Jungh. et de Vriese. Biodiversitas 11: 5-8. Inheritance and linkage analysis of glutamate oxalacetate transaminase (GOT) in P. merkusii were performed using megagametophyte tissues of single tree seed-lots. One monomorphic locus (GOT-A) and three polymorphic loci (GOT-B,GOT-C and GOT-D) were identified, based on the allelic 1: 1 segregation of putatively heterozygous trees. Linkage analysis revealed that GOTC and GOT-D were closely linked loci with an average recombination rate (R) of about 5%. This result which is in contrast to the GOT genetics in other pine species was discussed with regard to the probably occurring gene duplication of one GOT locus.
Population dynamic of the swallowtail butterfly, Papilio polytes (Lepidoptera: Papilionidae) in dry and wet seasons SUWARNO SUWARNO
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110105

Abstract

Suwarno (2010) Population dynamic of the swallowtail butterfly, Papilio polytes (Lepidoptera: Papilionidae) in dry and wet seasons. Biodiversitas 11: 19-23. The population dynamic of Papilio polytes L. (Lepidoptera: Papilionidae) in dry and wet seasons was investigated in the citrus orchard in Tasek Gelugor, Pulau Pinang, Malaysia. Population of immature stages of P. polytes was observed alternate day from January to March 2006 (dry season, DS), from April to July 2006 (secondary wet season, SWS), and from October to December 2006 (primary wet season, PWS). The population dynamics of the immature stages of P. polytes varied between seasons. The immature stages of P. polytes are more abundance and significantly different in the PWS than those of the DS and the SWS. The larval densities in all seasons decreased with progressive development of the instar stages. Predators and parasitoids are the main factor in regulating the population abundance of immature stages of P. polytes. There were positive correlations between the abundance of immature stages of P. polytes and their natural enemies abundance in each season. Ooencyrtus papilioni Ashmead (Hymenoptera: Encyrtidae) is the most egg parasitoid. Oxyopes quadrifasciatus L. Koch. and O. elegans L. Koch. (Araneae: Oxyopidae) are the main predators in the young larvae, meanwhile Sycanus dichotomus Stal. (Heteroptera: Reduviidae), Calotes versicolor Fitzinger (Squamata: Agamidae), birds and praying mantis attacked the older larvae.Key words: population dynamic, seasons, Papilio polytes, immature stages, natural enemies.
Butterfly diversity as a data base for the development plan of Butterfly Garden at Bosscha Observatory, Lembang, West Java TATI SURYATI SYAMSUDIN SUBAHAR; ANNISA YULIANA
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110106

Abstract

Subahar TSS, Yuliana A (2010) Butterfly diversity as a data base for the development plan of Butterfly Garden at Bosscha Observatory, Lembang, West Java. Biodiversitas 11: 24-28. Change of land use and the increasing number of visitors to Bosscha area was one factor for the development plan of butterfly garden in the area. The objectives of this research were to examine butterfly diversity and its potential for development plan of butterfly garden. Butterfly diversity and its richness conducted by standard walk methods. Host plantand larval food plant was recorded during butterfly survey. Public perception on the development plan of butterfly garden was examined by questionnaire. The results showed that 26 species of butterfly was found in Bosscha area and Delias belisama belisama was the most dominant species. Public perceptions consider that the development plan of butterfly garden will give benefit to the community; not only providing new insight (40.41%), additional tourism object (23.97%) and will gave aesthetical value (17.12%). Twelve local speciesshould be considered for development plan of butterfly garden: Papilio agamemnon, P. demoleus, P. memnon, P. sarpedon, Delias belisama, Eurema hecabe, Danaus chrysippus, Argynnis hyperbius, Cethosia penthesilea, Hypolimnas misippus, Melanitis phedima and Euthalia adonia. Host plant: Bougainvillea spectabilis, Citrus aurantium, Lantana camara, Macaranga tanarius and food plants: Citrus aurantium, Cosmos caudatus, Eupatorium inulifolium, Gomphrena globosa, Hibiscus rosa-sinensis, Lantana camara, and Tithonia diversifolia.Key words: host plant, butterfly diversity, Bosscha Observatory, standard walk.
Begonia “Tuti Siregar” (Begonia listada Smith &Wasshausen x Begonia acetosa Vellozo): a new cultivar from Bali Botanic Garden, Indonesia HARTUTININGSIH M. SIREGAR; I MADE ARDAKA; MUSTAID SIREGAR
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110104

Abstract

SiregarHM, Ardaka IM, Siregar M (2010) Begonia “Tuti Siregar” (Begonia listada Smith &Wasshausen x Begonia acetosa Vellozo): a new cultivar from Bali Botanic Garden, Indonesia. Biodiversitas 11: 15-18. A new Begonia cultivar was generated by crossing Begonia listada Smith & Wasshausen with Begonia acetosa Vellozo at Bali Botanic Garden began in 2005. The female flowers of B. listada were pollinated with pollen grains from B. acetosa. Begonia listada is characterized by the following characters: erect, non rhizomatous, branched subshrub to 1 m tall; leaves: blade above bronze, beneath purple with two pale green veins. B. acetosa has the following characters: creeping rhizomatous perennial to about 1 m tall; leaves: thick, blade above olive green, beneath bright red, both surfaceswith a dense covering of short stiff white hairs. The results of crossing is, herb, erect, non-rhizomatous, 40-75 cm height, stem brownish green, hairy, stipules in pairs, marcescent, ascending, membranous. Leaves, beautiful asymmetrical leaves intermediate between both parents; petiole deeply red, covered with wooly hairs, veins yellow like B. listada. The new cultivar, Begonia ‘Tuti Siregar’, has the American Begonia Society registration number 1001 (Salisbury 2008).Key words: Begonia “Tuti Siregar”, Bali Botanic Garden, Indonesia, new cultivar.
Diversity and community structure of dung beetles (Coleoptera: Scarabaeidae) across a habitat disturbance gradient in Lore Lindu National Park, Central Sulawesi SHAHABUDDIN SHAHABUDDIN
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110107

Abstract

Shahabuddin (2010) Diversity and community structure of dung beetles (Coleoptera: Scarabaeidae) across habitat disturbance gradient in Lore Lindu National Park, Central Sulawesi. Biodiversitas 11: 29-33. Dung beetles are important component of most terrestrial ecosystems and used to assess the effects of habitat disturbance and deforestation. This study aimed at comparing dung beetle assemblages among several habitat types ranging from natural tropical forest and agroforestry systems to open cultivated areas at the margin of Lore Lindu National Park (LLNP), Central Sulawesi (one of Indonesia’s biodiversity hotspots). Therefore, 10 pitfall traps baited with cattle dung were exposed at each habitat type (n = 4 replicate sites per habitat type) to collect the dung beetles. The resultsshowed that species richness of dung beetles declined significantly from natural forest to open area. However cacao agroforestry systems seemed to be capable of maintaining a high portion of dung beetle species inhabiting at forest sites. The closer relationship between dung beetle assemblages recorded at forest and agroforestry sites reflects the high similarity of some measured habitat parameters (e.g. vegetation structure and microclimate) between both habitat types, while species assemblages at open areas differedsignificantly from both other habitat groups. These results indicated that habitat type has importance effect on determining the species richness and community structure of dung beetles at the margin of LLNP.Key words: forest conversion, diversity, habitat selection, dung beetles marker.
Potentialities of line planting technique in rehabilitation of logged over area referred to species diversity, growth and soil quality PRIJANTO PAMOENGKAS
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110108

Abstract

Pamoengkas P (2010) Potentialities of line planting technique in rehabilitation of logged over area referred to species diversity, growth and soil quality. Biodiversitas 11: 34-39. Human interventions in the utilization of tropical forest resources are experiencing unanticipated consequences. The selective logging practices generally cause considerable damage to vegetation and the soil surface. It is supposed that soil condition and vegetation growth rate is deteriorated and reduced. Therefore, scientist strongly argue that the only wayto achieve sustainability of Indonesian natural forest will require that the production natural forest is managed through methods that are acceptable from the perspective of environment as well as timber production. This means that there will be a strong need and incentive for methods and innovative technology. For more than two decades, tropical rainforest in Indonesia have been managed intensively under the Indonesian selective cutting (TPI) and later on by the Indonesian selective cutting and replanting (TPTI) and then, selective cutting and line planting (TPTJ) system. TPTJ, as one example of selective cutting, recently become a proper alternative should be takeninto consideration in the management of production natural forest in Indonesia by planting dipterocarp species in line. In this system, planting line (width 3 m) and intermediate line (width 17 m) are made alternately. The initial width of line is 3 m and to be expanded until 10 m within 5 years to introduce more light. The objective of this research was to assess growth and soil quality of TPTJ system. The object of research was TPTJ plot of various ages from 1 year to 7 years. For achieving the objective, 14 sample plots measuring 200 m x 200 m each, were laid out at research plots. The result showed that growth respond of Shorea leprosula toward the width of planting line was better comparing to Shorea parvifolia, but generally from this growth assessment it seems that individual tree has a successfully performance. In terms of soil quality, it was seen that planting line establishment of 3 m and more, does not cause soil properties decrease in the whole plots.Key words: selective logging, production forest, selective cutting and line planting, dipterocarp species, growth, soil quality.
Characterizing forest reduction in Ketapang district, West Kalimantan, Indonesia ASEP SUNJAYA ADHIKERANA; JITO SUGARDJITO
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110110

Abstract

Adhikerana AS, Sugardjito J (2010) Characterizing forest reduction in Ketapang district, West Kalimantan, Indonesia. Biodiversitas 11: 46-54. We have characterized deforestation in the Ketapang district forests when we implemented the Orangutan (Pongo pygmaeus wurmbii) Conservation in Trans-boundary Landscape between Central and West Kalimantan provinces. For the purpose of evaluating the changes in land use and land cover in the study areas, a series of Landsat imageries have been analyzed. Each of the Landsat imagery data set for all study areas was initially classified using unsupervised classification into 13 different land-cover types. Ground truth checks were undertaken for Ketapang district forests and Sungai Puteri peat swamp forest, from which the results were used for the supervised land use classification of these two study areas. Between 1992 and 2000 there was only small conversion of primary forest into secondary forests. During this period barren land remained extensive about 30.17% of the total area of Ketapang district. Both agriculture and plantation areas substantially increased 56% and 55% respectively during 2003, while at the same time the extent ofboth primary and peat swamp forests were considerably reduced up to 15% and 28% respectively. The most striking conversion was from secondary forest to agricultural land and from peat swamp forest to swamp areas. A fraction of lowland forest was also converted into oil-palm plantation which was extended with considerable size into agricultural land. The patterns of land use changes detected in this study indicated a number of possible causes that trigger deforestation in this district include, the local government policy and market demand.Key words: deforestation, habitat fragmentation, Landsat, imagery, land use.
Fuel characteristics and trace gases produced through biomass burning BAMBANG HERO SAHARJO; SHIGETO SUDO; SEIICHIRO YONEMURA; HARUO TSURUTA
Biodiversitas Journal of Biological Diversity Vol. 11 No. 1 (2010)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d110109

Abstract

Saharjo BH, Sudo S, Yonemura S, Tsuruta H (2010) Fuel characteristics and trace gases produced through biomass burning. Biodiversitas 11: 40-45. Indonesian 1997/1998 forest fires resulted in forest destruction totally 10 million ha with cost damaged about US$ 10 billion, where more than 1 Gt CO2 has been released during the fire episode and elevating Indonesia to one of the largest polluters of carbon in the world where 22% of world’s carbon dioxide produced. It has been found that 80-90% of the fire comes from estate crops and industrial forest plantation area belongs to the companies which using fire illegally for the land preparation. Because using fire is cheap, easy and quick and also support the companies purpose in achieving yearly planted area target. Forest managementand land use practices in Sumatra and Kalimantan have evolved very rapidly over the past three decades. Poor logging practices resulted in large amounts of waste will left in the forest, greatly elevating fire hazard. Failure by the government and concessionaires to protect logged forests and close old logging roads led to and invasion of the forest by agricultural settlers whose land clearances practices increased the risk of fire. Several field experiments had been done in order to know the quality and the quantity of trace produced during biomass burning in peat grass, peat soil and alang-alang grassland located in South Sumatra, Indonesia. Result of research show that different characteristics of fuel burned will have the different level also in trace gasses produced. Peat grass with higher fuel load burned produce more trace gasses compared to alang-alang grassland and peat soil.Key words: peat soil, peat grass, alang-alang, biomass burning, trace gas.

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