NIA KURNIAWAN
Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Brawijaya. Jl. Veteran, Malang 65145, East Java, Indonesia

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Phylogenetic analysis of colubrid snakes based on 12S rDNA reveals distinct lineages of Dendrelaphis pictus (Gmelin, 1789) populations in Sumatra and Java FITRA ARYA DWI NUGRAHA; FATCHIYAH FATCHIYAH; NIA KURNIAWAN; ERIC NELSON SMITH
Biodiversitas Journal of Biological Diversity Vol. 19 No. 1 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190141

Abstract

Nugraha FAD, Fatchiyah F, Smith EN, Nia Kurniawan N. 2018. ­­Phylogenetic analysis of colubrid snakes based on 12S rDNA reveals distinct lineages of Dendrelaphis pictus (Gmelin, 1789) populations in Sumatra and Java. Biodiversitas 19: 303-310. The phylogenetic relationship among the major colubrid snakes, particularly those of the subfamily Colubrinae, has been the subject of much debate. Also, there was limited data on the molecular relationships of Sundaland colubrid snakes. This study aimed to examine the relationships among colubrid snakes from Sumatra and Java based on fragments of 12S rDNA gene. We sequenced 17 specimens of colubrid snakes representing 5 genera and 2 subfamilies: Colubrinae and Ahaetullinae. We used maximum likelihood, maximum parsimony and Bayesian inference methods for inferring phylogenetic relationships. The result of our phylogenetic analyses is in line with the previous findings for the separation between Colubrinae and Ahaetullinae. Interestingly, we found two distinct clades of Dendrelaphis pictus species with the high genetic divergence between them where D. pictus from Sumatra and West Java separated from Central and East Java clade. Our divergence time estimation showed that the differentiation between these clades of D. pictus occurred in the late Miocene epoch (8.9 Ma) when Sumatra and Java separated after being inundated in the early Miocene epoch.
Harvesting trends of Amboina box turtles (Cuora amboinensis) seventeen years after listing in Appendix II CITES Muhammad Alif Fauzi; Amir Hamidy; Nia Kurniawan
Biodiversitas Journal of Biological Diversity Vol. 21 No. 3 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210339

Abstract

Abstract. Fauzi MA, Hamidy A, Kurniawan N. 2020. Harvesting trends of Amboina box turtles (Cuora amboinensis) seventeen years after listing in Appendix II CITES. Biodiversitas 21: 1142-1148. Among Southeast Asian freshwater turtles, the Amboina box turtle (Cuora amboinensis) held the highest recorded harvesting levels. The large volumes of harvesting influenced its International Union for Conservation of Nature (IUCN) revised the conservation status of C.amboinensis from Near Threatened to Vulnerable in 2000. The Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) also inclusion of Amboina box turtle in Appendix II category. The CITES trade database provided a data set that tracks the legal trade of C. amboinensis in the global market from 2000 to 2017. Before 2005, Malaysia was the largest major supplier of this species to the global market. However, after 2005, Indonesia replaces Malaysia as the biggest exporter. From 2005 to 2014, the data showed that the trade trends already followed the quota of provisions. The trade routes of C amboinensis showed that the USA was the country to which these turtles were most frequently imported (50 times during 2000-2017), while China was still the biggest importer country in terms of quantity (463584 individuals from 2000-2017). The USA re-exported C. amboinensis for the pet trade to several European countries. Vietnam reportedly also re-exported C. amboinensis from Laos. However, Laos has rarely reported the occurrence of export activities to Vietnam. Based on these findings, we were able to understand the dynamics of the C. amboinensis trade globally more clearly, propose several actions deemed necessary for its conservation, and suggest greater on-going coordinated efforts to monitor the trade of this species.
DNA barcoding of the most common marine ornamental fish species spilled over from a small-sized marine protected area, Bali Barat National Park, Indonesia Dewa Gede Raka Wiadnya; Nia Kurniawan; Anik Martinah Hariati; Septiana Sri Astuti; Akhsan Fikrillah Paricahya; ‪Muhammad Dailami; Wahyu Endra Kusuma
Biodiversitas Journal of Biological Diversity Vol. 24 No. 1 (2023)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d240107

Abstract

Abstract. Wiadnya DGR, Kurniawan N, Hariati AM, Astuti SS, Paricahya AF, Dailami M, Kusuma WE. 2023. DNA barcoding of the most common marine ornamental fish species spilled over from a small-sized marine protected area, Bali Barat National Park, Indonesia. Biodiversitas 243: 47-54. Healthy coral reefs within a protected area may function as a source of recruitment to the surroundings through spill-over and export larvae. This study aims to generate a list of common species of marine ornamental fishes for the aquarium trade in Indonesia, mainly collected adjacent to Bali Barat National Park (BBNP). Lived-fish samples were collected from six fish collectors in two villages surrounding BBNP, Sumber Kima, Bali, and Bangsring, Banyuwangi. All species were checked by three active fishermen in both villages for confirmation of the most common species and not belonging to the target. A total of 82 separate groups out of 145 specimens were identified based on their morphological characters. All samples were then sequenced based on mitochondrial cytochrome oxidase subunit I (COI) gene amplification. The sequence read lengths for all the specimens were between 655 and 658 bp. All the findings from this DNA barcoding approach were in line with morphological species identification. Wrasses (Family: Labridae) were the most dominant (41 species) representing the group, followed by Pomacentridae (24 species), Acanthuridae (14 species), Pomacanthidae (14 species) and Gobiidae (10 species). Among the species, only green sergeant, Amblyglyphidodon batunaorum, belonged to the Vulnerable (VU) category based on IUCN criteria. The rest were either Least Concern (LC), Data Deficient (DD), or Not Evaluated (NE). It implied that no catch species were under fishing pressure except for the green sergeant. Considering a total of 28 target species by local fishermen (recorded in an earlier article), small-scale fishermen can easily catch more than 100 species in one trip. The results significantly contributed to the need to generate a list of common ornamental fish species specifically exported from Indonesia as an aquarium trade commodity.