Ridesti Rindyastuti
Purwodadi Botanic Gardens, Research Centre for Plant Conservation and Botanic Gardens, Indonesian Institute of Sciences. Jl. Raya Surabaya-Malang Km. 65, Purwodadi, Pasuruan 67163, East Java, Indonesia

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Genetic variation of agarwood producing tree (Gyrinops versteegii) from Pongkor, Manggarai District, Flores Island, Indonesia using ISSR molecular markers ALFI FAUZAN IRSYAD; Ridesti Rindyastuti; TITUT YULISTYARINI; AGUNG SRI DARMAYANTI; BUDI SETIADI DARYONO
Biodiversitas Journal of Biological Diversity Vol. 21 No. 2 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210208

Abstract

Abstract. Irsyad AF, Rindyaastuti R, Yulistyarini T, Darmayanti AS, Daryono BS. 2020. Genetic variation of agarwood producing tree (Gyrinops versteegii) from Pongkor, Manggarai District, Flores Island, Indonesia using ISSR molecular markers. Biodiversitas 21: xxxx. Agarwood is a black-colored tree wood that produces distinctive sap because of fungal infections which belong to Thymelaeaceae family (mainly Aquilaria and Gyrinops). Agarwood product is highly valuable that leading to over exploitations by the collectors. To develop the most effective and efficient conservation strategies, genetic information from these plants is required. The aims of this research are to determine the genetic variation and to confirm the species identity of agarwood producing tree (Gyrinops versteegii (Gilg.) Domke) population in Pongkor Community Forest, Pongkor, Manggarai District, Flores Island, East Nusa Tenggara. Information of the genetic variation, as well as the phenetic relatedness, were evaluated with inter-simple sequence repeat molecular marker (ISSR) using five primers; Ng2.01, Ng2.06, Ng3.01, Ng3.02, and UBC 855, with two other agarwood producing species as outgroup (Aquilaria filaria and Gyrinops decipiens). Amplified bands from all primers showed 55.17% polymorphic bands in G. versteegii. Genetic variation of G. versteegii identified with Nei’s genetic diversity (h value) obtained at 0.218. Clustering analysis from UPGMA dendrograms formed three major clusters. Degree of similarity of G. versteegii based on the dendrograms obtained at 85.9% using SSM method. The results showed close phenetic relatedness between individuals and relatively high genetic variation of G. versteegii, however, imply the need for strictly maintenance of habitat preservation and larger population size.
Analysis of morphological characteristics and phenetic relationship of ebony (Diospyros spp.) in Indonesia Ridesti Rindyastuti; Lia Hapsari; Anjar Tri Wibowo
Biodiversitas Journal of Biological Diversity Vol. 22 No. 7 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220723

Abstract

Abstract. Rindyaastuti R, Hapsati L, Wibowo AT. 2021. Analysis of morphological characteristics and phenetic relationship of ebony (Diospyros spp.) in Indonesia. Biodiversitas 22: 2738-2753. Diospyros L. (Ebenaceae) is an economically important genus that covers over 500 plant species. Members of this group are known to produce hard, dark, high-quality timbers known as ebony trees, while other members are known as persimmon trees. There is limited information on the morphological characters and phenetic relationship of this genus from Indonesian archipelago. In this work, we reported the phenetic clustering of 14 species of Indonesian Diospyros, based on plant habit, stem, leaves, and fruit characters, which was analysed using UPGMA and Jaccard similarity index. The phenetic dendrogram divided the 14 species of Diospyros into two main clusters which separating Subgen. Maba and Eudiospyros. Further, subgen. Maba was clustered into a single cluster while subgen. Eudiospyros was divided into 3 sub-clusters as sister groups. The clustering in Eudiospyros was supported by low SI and bootstrap value, demonstrating the high morphological variation of the subgenus. The sectional separation of Diospyros spp. was considered as paraphyletic. In general, our phenetic clustering exhibited suitability and relevancy with previous classification. Fruit size and trichomes are very important in this phenetic clustering, especially to form Eudiospyros subgenus. Fruit trichomes were also special characters related to biogeographical distribution following the Wallace line theory.