MARCELIA SUGATA
Department of Biology, Faculty of Science and Technology, Universitas Pelita Harapan. Jl. MH Thamrin Boulevard 1100, Tangerang 15811, Banten, Indonesia

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Isolation and identification of Bifidobacterium species from human breast milk and infant feces in Indonesia ROBIN DOSAN; SAMUEL OWEN MUDANA; CLARA MEIRINZHA PANG JULYANTO; EMILY TANIA PURNAMA; MARCELIA SUGATA; JUANDY JO; TJIE JAN TAN
Biodiversitas Journal of Biological Diversity Vol. 25 No. 1 (2024)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d250139

Abstract

Abstract. Dosan R, Mudana SO, Julyanto CMP, Purnama ET, Sugata M, Jo J, Tan TJ. 2024. Isolation and identification of Bifidobacterium species from human breast milk and infant feces in Indonesia. Biodiversitas 25: 337-343. There has been a growing interest in identifying emerging probiotic strains because of their benefits for human health. Many bifidobacteria originated from humans have been reported to possess probiotics properties. They are commonly found in the intestine of breast-fed infants. Hence, this study aimed to isolate and identify bifidobacteria from human breast milk and infant fecal samples in Indonesia and evaluate their probiotic properties. Twenty colonies were isolated from two independent fecal samples and two independent breast milk samples. Ten isolates (BR1-M1, BR1-B1, BR2-5, BR2-6, BR2-12, BS2-PB3, BS2-PB5, BS2-PS1, BS2-PS2, BS2-MB1) showed a compatible phenotypic character with Bifidobacteria based on the Bergey’s Manual, including Gram-positive, irregular rods, no catalase activity, non-spore-forming, and non-motile. Subsequently, four isolates with similar carbohydrate fermentation patterns as Bifidobacterium spp. were selected for further molecular identification based on 16S rRNA gene sequencing analysis. The results showed that BR2-5 and BR2-6 were found to be closely related to Bifidobacterium animalis subspecies lactis with 100 and 98.39% similarity, respectively. Meanwhile, BS2-PS1 and BS2-PB3 were found to be closely related to Bifidobacterium breve with 100 and 98.26% similarity, respectively. Further investigation revealed that BR2-5 and BS2-PB3 were resistant to low pH (?4) and could tolerate the exposure of bile salts (1%). Both isolates survived under different oxidative stress conditions (aerobic and microaerophilic). In conclusion, BR2-5 and BS2-PB3 exhibited promising characteristics as probiotic candidates, though further investigations are required to substantiate these current findings.
Analysis of heat-shock protein genes and their expression in Lactiplantibacillus plantarum SU-KC1a CLARA MEIRINZHA PANG JULYANTO; ROBIN DOSAN; HANS VICTOR; MARCELIA SUGATA; TJIE JAN TAN
Biodiversitas Journal of Biological Diversity Vol. 25 No. 6 (2024)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d250618

Abstract

Abstract. Julyanto CMP, Dosan R, Victor H, Sugata M, Tan TJ. 2024. Analysis of heat?shock protein genes and their expression in Lactiplantibacillus plantarum SU-KC1a. Biodiversitas 25: 2494-2499. Lactiplantibacillus plantarum is lactic acid bacteria commonly used as probiotics. Throughout the manufacturing and processing stages for incorporation into functional food products, probiotics encounter different stress conditions, including heat stress, which can affect their viability. In this study, the ability of L. plantarum SU-KC1a to withstand heat stress conditions was assessed by measuring cell viability after incubation at 37, 42, 47, and 52? for one hour. Additionally, the growth of SU-KC1a in liquid cultures under various high temperatures was monitored hourly for three hours. Total RNA was extracted from each culture, converted into cDNA, and amplified using hsp3 gene-specific primers. The results indicated a slower growth rate of SU-KC1a at higher temperatures, with 42? as the maximum temperature supporting growth. Visualization of hsp3 amplicon showed increased intensity following incubation at higher temperatures, indicating upregulation of hsp3 gene expression. To identify the presence of heat stress-related genes, whole genome sequence annotation data of SU-KC1a was compared to that of L. plantarum SK151, F75, and WCFS1. Lactiplantibacillus plantarum was found to possess two systems involved in protein repair in response to heat stress damage: chaperone and protease. In summary, L. plantarum SU-KC1a harbors heat shock protein genes, and their expression is upregulated following exposure to high temperatures.