Tegar Achsendo Yuniarta
Prodi Farmasi, Fakultas Farmasi dan Sains, Universitas Islam Bandung, Indonesia

Published : 2 Documents Claim Missing Document
Claim Missing Document
Check
Articles

Found 2 Documents
Search

Studi Penambatan Molekuler Piperine sebagai Inhibitor Asetilkolinesterase (AChE) untuk Alzheimer Muhammad Fikri Hakiki; Taufik Muhammad Fakih; Tegar Achsendo Yuniarta
Bandung Conference Series: Pharmacy 51 - 58
Publisher : UNISBA Press

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.29313/bcsp.v6i2.24216

Abstract

Abstract. Alzheimer’s disease is a progressive neurodegenerative disorder characterized by cognitive impairment resulting from the degeneration of cholinergic neurons. Inhibition of acetylcholinesterase (AChE) remains one of the principal therapeutic strategies to preserve acetylcholine levels in the synaptic cleft and alleviate disease symptoms. Piperine, the major alkaloid compound found in Piper nigrum L., has demonstrated neuroprotective properties and is considered a promising natural compound for Alzheimer’s disease therapy. This study aimed to evaluate the binding potential of piperine toward AChE using a molecular docking approach. The three-dimensional structure of AChE (PDB ID: 2GYU) was obtained from the Protein Data Bank and prepared using BIOVIA Discovery Studio Visualizer. Docking protocol validation was carried out through a redocking procedure prior to molecular docking simulations performed with AutoDock Vina. The docking analysis revealed a binding affinity of –8.07 kcal/mol and an estimated inhibition constant (Ki) of 1.21 µM. Molecular interaction analysis indicated that piperine formed Carbon Hydrogen Bond, Pi-Donor Hydrogen Bond, Pi-Pi Stacked, Alkyl, and Pi-Alkyl interactions with amino acid residues located within the active site of AChE. These findings suggest that piperine exhibits favorable binding characteristics toward AChE and may serve as a potential acetylcholinesterase inhibitor. Nevertheless, further investigations, including molecular dynamics simulations as well as in vitro and in vivo studies, are required to validate the stability of the ligand–protein complex and its biological activity. Abstrak. Penyakit Alzheimer merupakan gangguan neurodegeneratif progresif yang ditandai oleh penurunan fungsi kognitif akibat degenerasi neuron kolinergik. Salah satu pendekatan terapi yang banyak diterapkan untuk mengurangi gejala penyakit ini adalah menghambat aktivitas enzim asetilkolinesterase (AChE), sehingga kadar asetilkolin di celah sinaps dapat dipertahankan. Piperin, senyawa alkaloid utama yang terdapat pada Piper nigrum L., diketahui memiliki aktivitas neuroprotektif dan berpotensi dikembangkan sebagai kandidat inhibitor AChE. Penelitian ini bertujuan mengevaluasi kemampuan piperin dalam berikatan dengan enzim AChE menggunakan pendekatan molecular docking. Struktur tiga dimensi protein target (PDB ID: 2GYU) diperoleh dari Protein Data Bank dan dipreparasi menggunakan BIOVIA Discovery Studio Visualizer. Validasi metode dilakukan melalui proses redocking, kemudian dilanjutkan dengan simulasi docking menggunakan AutoDock Vina. Hasil simulasi menunjukkan bahwa piperin memiliki nilai binding affinity sebesar −8,07 kcal/mol dengan nilai inhibition constant (Ki) sebesar 1,21 µM. Analisis interaksi molekuler memperlihatkan terbentuknya interaksi Carbon Hydrogen Bond, Pi-Donor Hydrogen Bond, Pi-Pi Stacked, Alkyl, dan Pi-Alkyl dengan residu asam amino pada sisi aktif AChE. Temuan tersebut menunjukkan bahwa piperin mampu berikatan secara stabil dengan protein target dan berpotensi dikembangkan sebagai kandidat inhibitor asetilkolinesterase. Meskipun demikian, diperlukan penelitian lanjutan melalui simulasi molecular dynamics serta pengujian in vitro dan in vivo untuk mengonfirmasi kestabilan kompleks dan aktivitas biologisnya.
Molecular Docking Senyawa Xanthorrhizol sebagai Kandidat Antidiabetes Tipe 2 terhadap Target PTP1B Ismi Relivtintaeni; Taufik Muhammad Fakih; Tegar Achsendo Yuniarta
Bandung Conference Series: Pharmacy 59 - 66
Publisher : UNISBA Press

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.29313/bcsp.v6i2.24218

Abstract

Abstract. Diabetes mellitus is a metabolic disease characterized by increased blood glucose levels due to impaired insulin production or function. The development of natural product-based drug candidates has become one of the approaches that continues to be explored, including xanthorrhizol, which is known to possess various biological activities. This study aimed to analyze the potential of xanthorrhizol as an antidiabetic candidate through a molecular docking approach against the target receptor Protein Tyrosine Phosphatase 1B (PTP1B) with PDB ID 1XBO. The docking simulation was performed using AutoDock to determine the binding affinity value and interactions between the ligand and receptor. The results showed that xanthorrhizol exhibited a binding affinity value of -5.95 kcal/mol and was able to interact with the active site of the receptor through noncovalent interactions, including hydrogen bonds and hydrophobic interactions, which contributed to the stabilization of the ligand-receptor complex. Based on these results, xanthorrhizol has potential as a candidate compound for type 2 diabetes mellitus therapy and requires further investigation through biological evaluation. Abstrak. Diabetes melitus merupakan salah satu penyakit metabolik yang ditandai dengan peningkatan kadar glukosa darah akibat gangguan produksi maupun kerja insulin. Pengembangan kandidat obat berbasis bahan alam menjadi salah satu pendekatan yang terus dikembangkan, salah satunya melalui senyawa xanthorrhizol yang diketahui memiliki berbagai aktivitas biologis. Penelitian ini bertujuan untuk menganalisis potensi xanthorrhizol sebagai kandidat antidiabetes melalui pendekatan molecular docking terhadap reseptor target Protein Tyrosine Phosphatase 1B (PTP1B) dengan kode PDB 1XBO. Simulasi docking dilakukan menggunakan AutoDock untuk mengetahui nilai binding affinity serta interaksi antara ligan dan reseptor. Hasil penelitian menunjukkan bahwa xanthorrhizol memiliki nilai binding affinity sebesar −5,95 kcal/mol dan mampu berinteraksi dengan sisi aktif reseptor melalui interaksi nonkovalen berupa ikatan hidrogen dan interaksi hidrofobik yang berperan dalam menstabilkan kompleks ligan dengan reseptor. Berdasarkan hasil tersebut, xanthorrhizol memiliki potensi sebagai kandidat senyawa antidiabetes tipe 2 yang dapat dikaji lebih lanjut melalui pengujian biologis.