Ernawati A. Giri-Rachman
Sekolah Ilmu dan Teknologi Hayati, Institut Teknologi Bandung Jl. Ganesha 10 Bandung 40132 Indonesia

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Construction of Binary Vector With Wound Inducible Promoter for HbsAg Expression: Development of Plant-Based Edible Hepatitis B Vaccine from Indonesian Isolate Suhandono, Sony; Giri-Rachman, Ernawati A.; Zainuddin, Ima M.; Utari, Putri Dwi; Supraba, Apsari; Estiati, Amy
Annales Bogorienses Vol. 11 No. 1 (2007): Annales Bogorienses
Publisher : BRIN

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Abstract

Hepatitis B is a serious infectious disease in the third world countries including Indonesia. Vaccination is the most effective way to prevent the spread of the disease; therefore the demand for HBV vaccine is high. In order to produce more vaccine at lower cost, transgenic plant can be chosen to express the vaccine with the above criteria. Several researches were successfully producing transgenic plants expressing HBsAg that formed virus-like particles and induced immune response in human. However, HBsAg expression in transgenic plant needs to be improved especially on gene expression control system. Here, we describe the construction of HBsAg structural gene under the control of wound inducible promoter, MeEF1 promoter from Manihot esculenta Crantz. The HBsAg gene was amplified using PCR from HBV genome isolated from an Indonesian patient. The gene was subsequently fused with VSPaS signal peptide, which targeted the reticulum endoplasm of plant cell. The construct was cloned into binary expression vector for Agrobacterium plant transformation in near future.
Development of a novel multi-epitope peptide vaccine candidate against Mycobacterium tuberculosis using reverse vaccinology: A promising strategy for enhanced immunoprotection Hasan, Nur AHM.; Giri-Rachman, Ernawati A.; Nugrahapraja, Husna
Narra J Vol. 6 No. 1 (2026): April 2026
Publisher : Narra Sains Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.52225/narra.v6i1.2897

Abstract

Tuberculosis (TB) is a leading cause of death worldwide, caused by Mycobacterium tuberculosis (Mtb). The existing Bacillus Calmette-Guerin (BCG) vaccine has limitations, especially its reduced effectiveness in adults. This research focuses on developing a multi-epitope Mtb vaccine candidate through reverse vaccinology, aiming for a more effective and widely applicable solution. The study used the Vaxign2 pipeline to identify Mtb antigenic proteins, including PPE35, mpt83, mrsA, and rplK. Cytotoxic T cells (CTL), helper T cells (HTL), and B-cells, were predicted and selected based on their antigenicity, non-allergenicity, and non-toxicity. The chosen epitopes from these proteins, 4 CTL, 1 HTL, and 1 B cell epitope, were assembled into a multi-epitope vaccine construct, incorporating the adjuvant PADRE and linkers (EAAAK, AAY, and GPGPG). The vaccine candidate has a molecular weight of 10.68 kDa, with stability, hydrophilicity, and solubility confirmed. Its 3D structure was validated for quality and accuracy. Docking and molecular dynamics simulations with immune receptors TLR2 and TLR4 showed strong, stable interactions. The global population coverage of the vaccine candidate was reaching 98.19%. In silico cloning into the pET30a(+) vector in Escherichia coli BL21(DE3) was successful, with codon optimization (CAI: 0.98) and a GC content of 54.6%. Immunity simulations indicated enhanced activation of antigen-presenting cells, CTL, HTL, B cells, and antibody production. Overall, this study suggests vaccine candidate is a promising multi-epitope vaccine candidate, warranting further in vivo testing, including protein expression in E. coli.