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Kualitas Mikrobiologis Udara di Salah Satu Pusat Perbelanjaan di Jakarta Selatan Eko Pudjadi; Rima Suciyani; Innes Gania Sahira; Megga Ratnasari Pikoli
Al-Kauniyah: Jurnal Biologi Vol 8, No 2 (2015): Al-Kauniyah Jurnal Biologi
Publisher : Department of Biology, Faculty of Science and Technology, Syarif Hidayatullah State Islami

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15408/kauniyah.v8i2.2691

Abstract

The airborne bacteria and fungi in parking building, playground and food court in Blok M Square, South Jakarta, were assessed in order to investigate air quality in one of the shopping center in Jakarta. The air sample was passed through plate count agar and potato dextrose agar using a single-stage multi-orifice Sampler SKC Biostage Standard. Results showed that average microbial concen-trations were 200.17, 101.17, 55, 33 CFU bacteria per m3, and 109.54, 37.69, 27.09 CFU fungi per m3 of air volume in the parking building, the children playground and the food court, respectively. The most dominating bacteria had characteristicsresembleairborne Bacillus subtilis, while the most dominating fungi wereidentified as Cryptococcus sp., Aspergillus spp., Penicillium sp. and Candida sp. The microbial concentrations were different significantly (α=0,05) inall the three areas. In addition, there were strong relationship and significant influence between the concentrations of bacteria and fungi to temperature, humidity and light intensity in in all the three areas based on Pearson correlation analysis. For today, there is no air quality standard specifically for shopping center, so the data were compared tocommon standards for indoor air quality. The concentration of bacteria and fungi met the standard regulated by TheMinistry of Health Republic of IndonesiaNo.1405/MENKES/SK/ XI/2002 about Environmental Requirements for Office and Industrial., i.e <700 CFU/m3, and acceptable according to World Health Organization (WHO) with 500 CFU/m3 as a normal condition. In any case, it is advisable to be aware ofthe spread of airborne bacteria and fungi in shopping centersthat are potentially pathogenic.
A Sequential Isolation and Isolate Identification of Thermophilic Oil Degrading Bacteria from Bangko Reservoir Megga Ratnasari Pikoli; Pingkan Aditiawati; Dea Indriani Astuti
Journal of Mathematical and Fundamental Sciences Vol. 32 No. 2 (2000)
Publisher : Institute for Research and Community Services (LPPM) ITB

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Abstract

Sari. Telah dilakukan isolari bakteri termofilik pendegradasi minyak bumi dari Sumur Bangko dengan cara bertahap karena prosedur isolasi biasanya belum tentu dapat mengisolasi bakteri pendegradasi secara lengkap. Isolasi tahap I dilakukan langsung dari crude oil di dalam medium basal Stone Mineral Salt Solution ditambah ekstrak ragi (SMSSe) pada 50 °C. Isolasi tahap II dan III dilakukan dari sumber isolat yang sama, medium basal dan kondisi kultur yang sama, tetapi medium pengisolasi diperkaya dengan minyak sisa degradasi (MSD) isolat campuran tahap sebelumnya. Pada tahap I diperoleh 4 isolat, yaitu Bacillus polynyxa, B. licheniformis, Bacilus sp.1, dan Pseudomonas aeruginosa; pada tahap II diperoleh 3 isolat, yaitu Bacillus sp.2, B. stearothermophllus, dan B. brevis; sedangkan pada tahap III hanya diperoleh 1 isolat, yaitu B. coagulans. Semua isolat ini nantinya digunakan untuk mendegradasi crude oil. A Sequential Isolation and Isolate Identification of Thermophilic Oil Degrading Bacteria from Bangko ReservoirAbstract. A study on the isolation of thermophilic oil-degrading bacteria from the crude oil (petroleum) of Banko reservoir has been conducted on a sequential way. The conventional isolation procedure did not isolate the bacteria completely. The first isolation stage was performed directly on the crude oil sample by using Stone Mineral Salt Solution plus yeast extract (SMSSe), as basal medium, at 50°C. The second and third isolation stages used the same source, basal medium, and condition as the first stage, but were enriched with a depleted-oil obtained from the crude oil degraded from the previous stage's mixed culture bacteria. Four bacterial isolates were recovered from the first isolation stage, identified as Bacillus polymyxa, B. Licheniformis, Bacillus sp.1, and Pseudomonas aeruginosa. The second stage gave another three different bacterial isolates, identified as Bacillus sp.2, B. stearothermophillus, and B. brevis; whereas the third stage gave only one isolate namely Bacillus coagulans. These isolates could be applied for the degradation of crude oil.
JENIS PAKAN MEMPENGARUHI PRODUKSI BIOGAS DARI FESES GAJAH, STUDI KASUS GAJAH SUMATERA (Elephas maximus sumatranus Temminck, 1847) DI TAMAN MARGASATWA RAGUNAN, JAKARTA SELATAN Fuad Albani; Megga Ratnasari Pikoli; Irawan Sugoro
Jurnal Pengelolaan Sumberdaya Alam dan Lingkungan (Journal of Natural Resources and Environmental Management) Vol. 8 No. 2 (2018): Jurnal Pengelolaan Sumberdaya Alam dan Lingkungan (JPSL)
Publisher : Graduate School Bogor Agricultural University (SPs IPB)

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.29244/jpsl.8.2.264-270

Abstract

Elephant dung is a source of methane gas, which the gas is the main contributor to greenhouse gas if not used as fuel. Wild elephants use grass leaves as their feed, but in Ragunan Wildlife Park, elephants are fed also with a combination of elephant grass, sweet potatoes, maize, and bananas, which aim to meet immediate nutritional needs and ensure their health. Therefore, this study examined the biogas production of elephant feces associated with the feed given. The purpose of this study is to investigate the contribution of biogas that is emitted from the elephant feces as a result of two kinds of feed, which were elephant grass and combination of elephant grass, sweet potatoes, maize, and bananas. Previously, the elephants were acclimatized for 4 days with the two types of feed. Fermentation of the feces was conducted by using simple fermenters by volume of 3.42 L for 28 days and performed measurements of temperature, pH, concentration of ammonia, concentration of volatile fatty acids, substrate degradation and production of biogas. The result showed that the composition of feed affects the physico-chemical characteristics of the feces, production of ammonia and volatile fatty acids, substrate degradation and production of biogas.  The feces of Sumatran elephant fed with elephant grasses has higher potential for decomposition to mineralization into biogas and produce a higher proportion of methane gas carbon dioxide, than those fed with the combinated feed. This result needs to be a concern because with the fiber-rich feed like in their natural habitats, elephants have the potential to emit higher gas emissions. Therefore the biogas released from the elephant feces or other animals should be processed and utilized to meet the energy needs in the wildlife park itself.
Isolation and Characterization of Cellulolytic Bacteria During Natural Fermentation of Sweet Orange Peel Waste (Citrus sinensis) La Ode Sumarlin; Farida Ariyanti; Megga Ratnasari Pikoli; Anna Muawanah; Meyliana Wulandari
Al-Kauniyah: Jurnal Biologi Vol 15, No 2 (2022): AL-KAUNIYAH JURNAL BIOLOGI
Publisher : Department of Biology, Faculty of Science and Technology, Syarif Hidayatullah State Islami

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15408/kauniyah.v15i2.23357

Abstract

Abstract Orange peel is one of organic waste which contains fibers, such as cellulose and hemicellulose utilized by cellulolytic microorganisms as growth media in the fermentation process. Cellulolytic microorganisms are widely used in many industries. This research will observe the profile of bacterial colonies, particularly cellulosic bacteria, during the fermentation of orange peels (Citrus sinensis). Fermentation was carried out during the research process; the bacteria were further isolated in Carboxymethyl Cellulose (CMC) media. The fermentation process was performed for 14 weeks where sampling on the first week was done every day for five days (H0–H4), while sampling from the 2nd to 14th weeks were conducted once a week (M2–M14). The isolation process was carried out in a Nutrient Agar medium with spreading method by calculating the Total Plate Count (TPC) of bacterial colonies and observing the macroscopic morphology of bacterial colonies. Bacterial counts are expressed in Colony Forming Units (CFU)/mL or viable count/mL. The identification of bacterial genus was based on the Bergey's Manual of Determinative Bacteriology. Bacterial isolation from the fermentation of sweet orange peel resulted in 20 isolates where 16 isolates were found to be cellulolytic bacteria through qualitative test in Carboxymethyl Cellulose (CMC) agar plate. The hypothetic genus of 16 bacterial isolates were Eubacterium, Cellulomonas, Microbacterium, Micrococcus, Planococcus, Pseudomonas, Azotobacter, Azomonas, Flavobacterium, Cytophaga, and Jonesia. Isolate F15 (Cytophaga and Azomonas) was found to dominate the growth, while other isolates grew alternately with lesser frequency. Hypothetic genus of bacteria actively involved in the process were cellulolytic bacteria, allowing the liquid of fermentation products to be possibly used in the application.AbstrakKulit jeruk merupakan salah satu limbah organik yang mengandung serat seperti selulosa dan hemiselulosa yang dapat dimanfaatkan oleh mikroorganisme selulolitik sebagai media pertumbuhan dalam proses fermentasi. Mikroorganisme selulolitik telah digunakan di banyak industri. Penelitian ini mengamati profil koloni bakteri selama proses fermentasi kulit jeruk terutama bakteri selulotik. Selama proses penelitian dilakukan proses fermentasi, lalu bakteri diisolasi menggunakan media Carboxyl Methyl Callulose (CMC). Proses fermentasi dilakukan selama 14 minggu dengan rincian sampling pada Minggu ke-1 dilakukan setiap hari selama 5 hari (H0–H4), sedangkan minggu ke-2 hingga 14 dilakukan setiap seminggu sekali (M2–M14). Proses isolasi dilakukan dalam medium Nutrient Agar dengan teknik sebar dengan perhitungan koloni Total Plate Count (TPC) dan pengamatan morfologi koloni bakteri secara makroskopis. Hasil perhitungan bakteri dinyatakan dalam Colony Forming Units (CFU)/mL atau viabel count/mL. Pendugaan genus bakteri berdasarkan Bergey's Manual of Determinative Bacteriology. Hasil isolasi bakteri dari fermentasi kulit jeruk manis adalah 20 isolat yang 16 di antaranya merupakan bakteri selulolitik melalui uji kualitatif pada media plat Carboxymethyl Cellulose (CMC). Genus hipotetik bakteri dari 16 isolat adalah Eubacterium, Cellulomonas, Microbacterium, Micrococcus, Planococcus, Pseudomonas, Azotobacter, Azomonas, Flavobacterium, Cytophaga, dan Jonesia. Isolat F15 (Cytophaga dan Azomonas) mendominasi pertumbuhan, sedangkan isolat lain tumbuh berselang seling dengan frekuensi yang lebih kecil. Genus bakteri hipotetik yang terlibat aktif adalah bakteri selulolitik sehingga cairan hasil fermentasi dapat digunakan dalam aplikasi.
ANALYSIS OF NEW PRIMER PAIR CANDIDATES OF rbcL GENE FOR IDENTIFICATION OF MICROALGAE SCENEDESMACEAE Megga Ratnasari Pikoli
BIOLINK (Jurnal Biologi Lingkungan Industri Kesehatan) Vol. 9 No. 2 (2023): February
Publisher : Universitas Medan Area

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.31289/biolink.v9i2.7918

Abstract

Scenedesmaceae is one of the microalgae groups that has been widely studied as promising biodiesel feedstock. Its morphological identification is often confused by environmental changes, so it requires molecular identification as well. The current study aimed to obtain primer pair candidates that identify the Scenedesmaceae based on the rbcL gene. The research used bioinformatics tools, which harvested rbcL protein sequence data, performed multiple sequence alignments, and designed primers based on conserved and less-conserved regions. The best left and right primers selected based on sequence length, melting temperature, 3' end stability, number of hairpins, and self-dimers, were paired, and three candidates were obtained. The three pairs were examined based on melting temperature difference, number of hetero-dimers, length of amplified nucleotide product, number of hits, and number of genera captured from the GenBank. Sce-16 (F, 5'-TGGTCGTGCTGTTTATGAATGT-3' and 1_RL, 5'-TGCCAAACATGAATACCACCA-3'), which is back-translated according to Hariotina sp. (AOY36008.1), is the most preferred candidate compared to the other two pairs after discussing their advantages and disadvantages. In the future, the proposed primer candidate needs to be validated through in vitro amplification with some optimizations to eliminate potential weaknesses.