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All Journal PELS (Procedia of Engineering and Life Science) Journal of Medical and Health Science
Hamad, Sara Salam
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Computer Science & IT Control & Systems Engineering Decision Sciences, Operations Research & Management Electrical & Electronics Engineering Engineering Health Professions Medicine & Pharmacology Public Health

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Journal : PELS (Procedia of Engineering and Life Science)

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Effective Primer Selection for Differentiating Periplaneta Species via PCR Khaled, Shifaa Waleed; Hamad, Sara Salam
Procedia of Engineering and Life Science Vol. 4 (2023): Proceedings of the 6th Seminar Nasional Sains 2023
Publisher : Universitas Muhammadiyah Sidoarjo

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.21070/pels.v4i0.1630

Abstract

This study utilized random polymerase chain reaction (PCR) with 10 random primers to differentiate between two insect species, Aegyptica Periplaneta and Periplaneta japonic. The results revealed a total of 29 bands, with 23 being polymorphic. The classification of the animal kingdom, especially insects, is complex due to the abundance and diversity of organisms. Traditional phenotypic methods often fall short in identifying closely related species, necessitating molecular approaches. Primers OP-A04, OP-A08, OP-B14, OP-B18, OP-C10, OP-C15, and OP-C18 showed the highest polymorphism (100%), while OP-A15 and OP-B09 had the lowest (40%). Primer OP-C06 exhibited no bands, indicating 0% polymorphism. Primers OP-A08 and OP-A15 had the highest efficiency (17.241%), whereas OP-C06, OP-C10, and OP-C15 had the lowest (3.448%). Notably, primer OP-A15 successfully discriminated between the species, while OP-C06 failed entirely. These findings underscore the importance of primer selection in molecular identification and suggest OP-A15 as a reliable primer for distinguishing between these Periplaneta species. Highlights: Primer OP-A15 effectively discriminated between Aegyptica Periplaneta and Periplaneta japonic. High polymorphism observed with primers OP-A04, OP-A08, OP-B14, OP-B18, OP-C10, OP-C15, and OP-C18. Primer OP-C06 showed 0% polymorphism and failed to differentiate between species. Keywords: Insect Classification, PCR, Random Primers, Species Differentiation, Periplaneta
Co-Authors Hussein, Arwa Alaa Khaled, Shifaa Waleed Razzaq, Alaa Siham Abdul