Biodiversitas Journal of Biological Diversity
Vol. 23 No. 9 (2022)

Next generation sequencing reveals plants consumed by the vulnerable ebony langur (Trachypithecus auratus) in a fragmented mountain forest

Puguh Karyanto (Doctoral Program of Biology, Faculty of Mathematics and Natural Science, Universitas Sebelas Maret. Jl. Ir. Sutami 36A Surakarta 57126, Central Java, Indonesia)
Adifa Risa Bagasta (Graduate Program of Bioscience, Faculty of Mathematics and Natural Sciences, Universitas Sebelas Maret. Jl. Ir. Sutami 36A Surakarta 57126, Central Java, Indonesia)
IKE NURJUITA NAYASILANA (Department of Forestry, Faculty of Agriculture, Universitas Sebelas Maret. Jl. Ir. Sutami 36A Surakarta 57126, Central Java, Indonesia)
SHUKOR MD NOR (Department for Biological Science and Conservation, Faculty of Science and Technology, ¬Universiti Kebangsaan Malaysia. Bangi, Selangor 43600, Malaysia)
Sri Suci Utami Atmoko (Faculty of Biology, Universitas Nasional. Jl. Sawo Manila, Pejaten, Pasar Minggu, South Jakarta 12520, Jakarta, Indonesia)
Ari Susilowati (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Sebelas Maret. Jl. Ir. Sutami 36A Surakarta 57126, Central Java, Indonesia)
SUNARTO SUNARTO (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Sebelas Maret. Jl. Ir. Sutami 36A Surakarta 57126, Central Java, Indonesia)



Article Info

Publish Date
24 Sep 2022

Abstract

Abstract. Karyanto P, Bagasta AR, Nayasilana IN, Nor SMD, Atmoko SSU, Susilowati A, Sunarto 2022. Next generation sequencing reveals plants consumed by the vulnerable ebony langur (Trachypithecus auratus) in a fragmented mountain forest. Biodiversitas 23: 4759-4769. Many mountain forests on Java Island have suffered from forest degradation, fragmentation, and alien species invasion that cause a significant change in vegetation structure. This changing floristic structure may affect the foraging substrate of the foliage eater ebony langur, Trachypithecus auratus. Hence, ascertaining the plants eaten by the langur may contribute significantly to informing important ecological data about its foraging adaptation and conservation. We analyzed six fecal samples of the langur from three forest sites in Mount Merbabu National Park, Indonesia. This research used the plant mini barcode to sequence the ribulose-biphosphate carboxylase gene (rbcl) in the mitochondrial DNA of the plants eaten by the langur using the Next Generation Sequencing. We compare the NGS results to floristic reference data from a vegetation survey preceding the fecal analysis. The NGS found 238 OTUs that belong to 32 taxa. Most of the langur’s diet belongs to the lower crop community. The study’s results suggest that the ebony langur’s dietary composition shows an adaptation to the new floristic composition. However, since the habitat is continuously degraded, the stakeholders must perform appropriate home-building-based habitat management practices to conserve this vulnerable species.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...